RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TVP23BQ9NYZ1 205 aa12.77□□□□□ -0.37
SKA3-202ENST00000314759 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
SKA3-202ENST00000314759 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.37
SKA3-202ENST00000314759 YARS2Q9Y2Z4 477 aaKnown RBP12.77□□□□□ -0.37
SKA3-202ENST00000314759 ALG5Q9Y673 324 aa12.77□□□□□ -0.37
SKA3-202ENST00000314759 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.37
SKA3-202ENST00000314759 SLC5A10A0PJK1 596 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 PRKYO43930 277 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 BCHEP06276 602 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 IL3P08700 152 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TNNI3P19429 210 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 POU3F3P20264 500 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 ALAS2P22557 587 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 SDC2P34741 201 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 IRS1P35568 1242 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 ETV5P41161 510 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 ETV1P50549 477 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
SKA3-202ENST00000314759 QPRTQ15274 297 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 GPR19Q15760 415 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TPGS2Q68CL5 300 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 PGBD2Q6P3X8 592 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 AMIGO1Q86WK6 493 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TMC8Q8IU68 726 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 HORMAD2Q8N7B1 307 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 SORBS1Q9BX66 1292 aaKnown RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 SPNS1Q9H2V7 528 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 NDRG2Q9UN36 371 aaKnown RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 KIAA1671Q9BY89 1806 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TLX2O43763 284 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 OR2B3O76000 313 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 RPL3P39023 403 aaKnown RBP12.76□□□□□ -0.37
SKA3-202ENST00000314759 GSTM5P46439 218 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 OCLNQ16625 522 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 FAM92BQ6ZTR7 304 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 HTR3DQ70Z44 454 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 CPXM2Q8N436 756 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 OR4D11Q8NGI4 311 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 OR52I1Q8NGK6 324 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 ENKURQ8TC29 256 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 FAM83CQ9BQN1 747 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 HSPB11Q9Y547 144 aa12.76□□□□□ -0.37
SKA3-202ENST00000314759 CKMP06732 381 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 CPEP16870 476 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 UQCRC2P22695 453 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 HLA-DMAP28067 261 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 PBLDP30039 288 aaPredicted RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 MAN2A2P49641 1150 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TNK1Q13470 666 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ATAT1Q5SQI0 421 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 HENMT1Q5T8I9 393 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 UNC5DQ6UXZ4 953 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 GDPD4Q6W3E5 623 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 DEF8Q6ZN54 512 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 LIX1LQ8IVB5 337 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ZNF740Q8NDX6 193 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SLC7A13Q8TCU3 470 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TTC9Q92623 222 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TMEM19Q96HH6 336 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 IGSF21Q96ID5 467 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 NLNQ9BYT8 704 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TMEM245Q9H330 911 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 KCNN3Q9UGI6 736 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 FAAHO00519 579 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ARHGEF9O43307 516 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 NOS1APO75052 506 aaPredicted RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 H1F0P07305 194 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 C1GALT1C1LP0DN25 315 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 PSKH1P11801 424 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 APEX1P27695 318 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 DGKGP49619 791 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 POLR2LP62875 67 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 BNC1Q01954 994 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 DDI2Q5TDH0 399 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 HSDL2Q6YN16 418 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SLC30A8Q8IWU4 369 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 IL17RCQ8NAC3 791 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ATP6V1C2Q8NEY4 427 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 MYLIPQ8WY64 445 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 MALT1Q9UDY8 824 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 DIMT1Q9UNQ2 313 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 SATB2Q9UPW6 733 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms