RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 GOLGA8NF8WBI6 632 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 DDCP20711 480 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 FEN1P39748 380 aaKnown RBP16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 ZNF750Q32MQ0 723 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 C6orf163Q5TEZ5 329 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 NXNQ6DKJ4 435 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 TICAM1Q8IUC6 712 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 SIRT6Q8N6T7 355 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 B3GNT7Q8NFL0 401 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 M1APQ8TC57 530 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 BRIX1Q8TDN6 353 aaKnown RBP16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 DOK4Q8TEW6 326 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 NUDT9Q9BW91 350 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 OR8D2Q9GZM6 311 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 PTGFRNQ9P2B2 879 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 ENTPD4Q9Y227 616 aa16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 WBP11Q9Y2W2 641 aaKnown RBP16.34■□□□□ 0.21
SWSAP1-201ENST00000312423 NBEAQ8NFP9 2946 aa16.33■□□□□ 0.21
SWSAP1-201ENST00000312423 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.21
SWSAP1-201ENST00000312423 A8MUI8 341 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 SDHDO14521 159 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 MGRN1O60291 552 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 CEACAM4O75871 244 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 ALPPP05187 535 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 SLC35E2P0CK97 266 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 CPMP14384 443 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 PORP16435 677 aaPredicted RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 CSNK2A2P19784 350 aaPredicted RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 NT5EP21589 574 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 EPHA3P29320 983 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 ASMTP46597 345 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 SOX8P57073 446 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 BNIP1Q12981 228 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 AGAP7PQ5VUJ5 663 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 EXD3Q8N9H8 876 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 PTPMT1Q8WUK0 201 aaPredicted RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 RIT1Q92963 219 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 NCLNQ969V3 563 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 AGAP4Q96P64 663 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 WDR55Q9H6Y2 383 aaPredicted RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 MMP25Q9NPA2 562 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 EHD3Q9NZN3 535 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 TUBD1Q9UJT1 453 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 PCDHGA9Q9Y5G4 932 aaKnown RBP16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 USH1CQ9Y6N9 552 aa16.33■□□□□ 0.2
SWSAP1-201ENST00000312423 KLHL41O60662 606 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 UBOX5O94941 541 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 PRPS2P11908 318 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 LBPP18428 481 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 ERVK-8P63133 956 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 EMX2Q04743 252 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 JMJD6Q6NYC1 403 aaPredicted RBP16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 DGAT2L6Q6ZPD8 337 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 LRRC25Q8N386 305 aaPredicted RBP16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 MORN4Q8NDC4 146 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 NFAM1Q8NET5 270 aaPredicted RBP16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 SLC2A12Q8TD20 617 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 VMP1Q96GC9 406 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 BBS4Q96RK4 519 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 CNPPD1Q9BV87 410 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 SLC35C2Q9NQQ7 365 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 ZNF71Q9NQZ8 489 aaPredicted RBP16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 COPS7AQ9UBW8 275 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 TP53TG5Q9Y2B4 290 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 DOCK10Q96BY6 2186 aa16.32■□□□□ 0.2
SWSAP1-201ENST00000312423 TRBV11-1A0A0K0K1C0 115 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 SFTPCP11686 197 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 HPCAL1P37235 193 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 CLCN2P51788 898 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 NCALDP61601 193 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 ZNF267Q14586 743 aaPredicted RBP16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 PTGR1Q14914 329 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 SMU1Q2TAY7 513 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 ANKRD26P1Q6NSI1 321 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 PCSK4Q6UW60 755 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 SAMD14Q8IZD0 417 aaPredicted RBP16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 CNRIP1Q96F85 164 aaPredicted RBP16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 WBP1Q96G27 269 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 ART5Q96L15 291 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 REEP4Q9H6H4 257 aa16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 TNRC6AQ8NDV7 1962 aaKnown RBP16.31■□□□□ 0.2
SWSAP1-201ENST00000312423 ATXN7O15265 892 aaPredicted RBP16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 G6PDP11413 515 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 PTGER1P34995 402 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 ELF3P78545 371 aaPredicted RBP16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 RIPK1Q13546 671 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 SLC9B1Q4ZJI4 515 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 FCRLBQ6BAA4 426 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 LINC00696Q6ZRV3 163 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 LARP4Q71RC2 724 aaKnown RBP eCLIP16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 MAVSQ7Z434 540 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 GALNT12Q8IXK2 581 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
SWSAP1-201ENST00000312423 DEFB126Q9BYW3 111 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms