RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZBTB18Q99592 522 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 DPY30Q9C005 99 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 LHPPQ9H008 270 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 ADNPQ9H2P0 1102 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 NPHS2Q9NP85 383 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 ACSS1Q9NUB1 689 aaPredicted RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GIMAP2Q9UG22 337 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 BAIAP2L1Q9UHR4 511 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 TEKT2Q9UIF3 430 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 PCDHGB7Q9Y5F8 929 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 PCDHGA9Q9Y5G4 932 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 DSPP15924 2871 aaKnown RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 PDPK1O15530 556 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 BCAS2O75934 225 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 CLCN2P51788 898 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 DIO3P55073 304 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 LRRC74AQ0VAA2 488 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 TBR1Q16650 682 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 PDCD4Q53EL6 469 aaKnown RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 CPTPQ5TA50 214 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 HPS6Q86YV9 775 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 RIMKLAQ8IXN7 391 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 OR7G1Q8NGA0 311 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 OR1N1Q8NGS0 311 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 OR8K3Q8NH51 312 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 ZNF675Q8TD23 568 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 PTPMT1Q8WUK0 201 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 EXOSC8Q96B26 276 aaKnown RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 TESCQ96BS2 214 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 CNRIP1Q96F85 164 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 WBP1Q96G27 269 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 ZNF681Q96N22 645 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 BHLHE41Q9C0J9 482 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 RABEP2Q9H5N1 569 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 CXorf21Q9HAI6 301 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 ZIM2Q9NZV7 527 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 SH3BP4Q9P0V3 963 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 PKD1L2Q7Z442 2459 aa16.72■□□□□ 0.27
SSSCA1-201ENST00000309328 EPG5Q9HCE0 2579 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 A0A0G2JND7 137 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 OR6C76A6NM76 312 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 MYO1GB0I1T2 1018 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 MKRN2OSH3BPM6 223 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 ERVH48-1M5A8F1 160 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 CEACAM4O75871 244 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 ITGA3P26006 1051 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 LSP1P33241 339 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 ID2Q02363 134 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 MYBPC3Q14896 1274 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 MLC1Q15049 377 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 COL28A1Q2UY09 1125 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 MMP21Q8N119 569 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 LGI4Q8N135 537 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 SLC5A8Q8N695 610 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 VPS37AQ8NEZ2 397 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 CLHC1Q8NHS4 586 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 COQ8BQ96D53 544 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 OR52B2Q96RD2 323 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 ARHGAP9Q9BRR9 750 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 SDR39U1Q9NRG7 319 aaPredicted RBP16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 C5AR2Q9P296 337 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 KLHL14Q9P2G3 628 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 CFL2Q9Y281 166 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 GPR45Q9Y5Y3 372 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 USP24Q9UPU5 2620 aa16.71■□□□□ 0.27
SSSCA1-201ENST00000309328 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 GABRR3A8MPY1 467 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 AKAP10O43572 662 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 LRATO95237 230 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 ALDOCP09972 364 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 NT5EP21589 574 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 FRKP42685 505 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 ATP4BP51164 291 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 MAP4K2Q12851 820 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 CRB2Q5IJ48 1285 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 AGAP7PQ5VUJ5 663 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 MIER2Q8N344 545 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 VWA5B2Q8N398 1253 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 OR8J2Q8NGG1 315 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 SLC2A12Q8TD20 617 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 ELP5Q8TE02 316 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 GFM2Q969S9 779 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 SENP5Q96HI0 755 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 RILPQ96NA2 401 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 AGAP4Q96P64 663 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 SEMA4CQ9C0C4 833 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 NEUROD4Q9HD90 331 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 GPR83Q9NYM4 423 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 EXO1Q9UQ84 846 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 LOC400499M0QZD8 3231 aa16.7■□□□□ 0.26
SSSCA1-201ENST00000309328 ANKRD28O15084 1053 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 KIR3DL1P43629 444 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 GPR143P51810 404 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 PGDP52209 483 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 NCBP2P52298 156 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 ARFIP2P53365 341 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 POLE2P56282 527 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms