RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PRAMEF10O60809 474 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 GLRA3O75311 464 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SUPT3HO75486 399 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 STK16O75716 305 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 ATE1O95260 518 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 CCNDBP1O95273 360 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 CCL4P13236 92 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 PVRP15151 417 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 FOLR1P15328 257 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 NAGAP17050 411 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SPINK2P20155 84 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 GRK5P34947 590 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 GDF5P43026 501 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 GABRA4P48169 554 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 EEF1A1P68104 462 aaKnown RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 SH3BP2P78314 561 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 EEF1A2Q05639 463 aaKnown RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 PCDH1Q08174 1060 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 DAG1Q14118 895 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 IL11RAQ14626 422 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 C18orf21Q32NC0 220 aaPredicted RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 NHSL2Q5HYW2 709 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 C3orf38Q5JPI3 329 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 THEMIS2Q5TEJ8 643 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 EEF1A1P5Q5VTE0 462 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 FIGLAQ6QHK4 219 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 H1FNTQ75WM6 255 aaPredicted RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 EXOC3L1Q86VI1 746 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 THOC6Q86W42 341 aaKnown RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 PAQR7Q86WK9 346 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SRRM1Q8IYB3 904 aaKnown RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 C4orf33Q8N1A6 199 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 DNAJC22Q8N4W6 341 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SLC24A4Q8NFF2 622 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 OR4K1Q8NGD4 311 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 OR8K5Q8NH50 307 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 FAM71F1Q96KD3 344 aaPredicted RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 NR1H4Q96RI1 486 aaPredicted RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 DPH7Q9BTV6 452 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SF3B5Q9BWJ5 86 aaKnown RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 C1QTNF3Q9BXJ4 246 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 TEX12Q9BXU0 123 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 FAM60AQ9NP50 221 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SLC6A20Q9NP91 592 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 PILRAQ9UKJ1 303 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 SNX7Q9UNH6 387 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 POLR3KQ9Y2Y1 108 aaPredicted RBP7.81□□□□□ -1.16
CHD6-201ENST00000309279 PLLPQ9Y342 182 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 ASB1Q9Y576 335 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 GPR45Q9Y5Y3 372 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 ACTL7BQ9Y614 415 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 KCNE2Q9Y6J6 123 aa7.81□□□□□ -1.16
CHD6-201ENST00000309279 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 EFCAB7A8K855 629 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 A8MV72 311 aaPredicted RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 CDRT15L2A8MXV6 281 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 H3BMH7 237 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 SOCS6O14544 535 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 COPEO14579 308 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 IDH3BO43837 385 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 TYROBPO43914 113 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 PLIN3O60664 434 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 CTSVO60911 334 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 GUCY1B2O75343 617 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 WDR47O94967 919 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 CLEC3BP05452 202 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 LIPFP07098 398 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 EBLN1P0CF75 366 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 FGF5P12034 268 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 GFAPP14136 432 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 HGFP14210 728 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 CREB1P16220 341 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ITIH1P19827 911 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 S100A1P23297 94 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 GCKP35557 465 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ARL4DP49703 201 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 AGTR2P50052 363 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 MECP2P51608 486 aaKnown RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 ATP12AP54707 1039 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 RAB15P59190 212 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 PSMA6P60900 246 aaKnown RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 TSTA3Q13630 321 aaPredicted RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 E2F2Q14209 437 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 KCNAB1Q14722 419 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ZNF628Q5EBL2 1059 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 SGO1Q5FBB7 561 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 CFAP157Q5JU67 520 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 BROXQ5VW32 411 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 FBXO42Q6P3S6 717 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 CYB5D1Q6P9G0 228 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 LRRC70Q7Z2Q7 622 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 C17orf64Q86WR6 236 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ARMC8Q8IUR7 673 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ST13P4Q8IZP2 240 aaPredicted RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 NEIL2Q969S2 332 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ESAMQ96AP7 390 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ZNF501Q96CX3 271 aaPredicted RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 APOPT1Q96IL0 206 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms