RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 OR4K3Q96R72 315 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM38AQ9H6F2 299 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 RRAGCQ9HB90 399 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 KLHL42Q9P2K6 505 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ATP6V1HQ9UI12 483 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ADAM30Q9UKF2 790 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ING4Q9UNL4 249 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 A8MVJ9 347 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 FAAHO00519 579 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ARSBP15848 533 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CELP19835 753 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 PRKACBP22694 351 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ELAVL4P26378 380 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 TALDO1P37837 337 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CTSOP43234 321 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 KLHL22Q53GT1 634 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CCDC149Q6ZUS6 474 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 C11orf96Q7Z7L8 435 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 IQCHQ86VS3 1027 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 TCTE3Q8IZS6 198 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 C7orf57Q8NEG2 295 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 OTUB1Q96FW1 271 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CCDC120Q96HB5 630 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 PPIL3Q9H2H8 161 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 NIPAL2Q9H841 368 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SLC25A19Q9HC21 320 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 LSM2Q9Y333 95 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 COL4A4P53420 1690 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 KIAA0100Q14667 2235 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TRAV6A0A075B6T7 132 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 E9PQ18 207 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CH25HO95992 272 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 FURINP09958 794 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 NR2F1P10589 423 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CD70P32970 193 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PRKAG1P54619 331 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SMIM11AP58511 58 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 RRAS2P62070 204 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 KCNC3Q14003 757 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 LRRC32Q14392 662 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CDH24Q86UP0 819 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM145Q8NBT3 493 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 NEIL3Q8TAT5 605 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 HCAR2Q8TDS4 363 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 C2orf15Q8WU43 125 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 LINC01599Q8WXQ3 324 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ZBED6CLQ96FA7 236 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF607Q96SK3 696 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 MARCH5Q9NX47 278 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 C5AR2Q9P296 337 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PIPSLA2A3N6 862 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 GSAPA4D1B5 854 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 HEPACAM2A8MVW5 462 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 NPIPB8E9PQR5 432 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 FFAR1O14842 300 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 MSL3P1P0C860 447 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 HMGA2P52926 109 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF33BQ06732 778 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.715e-6■□□□□ 10.2
PTPN7-201ENST00000309017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 B3GLCTQ6Y288 498 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 LUZP2Q86TE4 346 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TEX47Q8TBZ9 253 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TM9SF4Q92544 642 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 EXOSC8Q96B26 276 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SLC6A16Q9GZN6 736 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PCDH10Q9P2E7 1040 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SLC13A4Q9UKG4 626 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CLEC4EQ9ULY5 219 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 C2orf92A0A1B0GVN3 265 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CD8B2A6NJW9 211 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 M0R3H8 397 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SERPIND1P05546 499 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 URODP06132 367 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CD8BP10966 210 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ITGB7P26010 798 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 IMPA1P29218 277 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 BUD31P41223 144 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TBPL1P62380 186 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CDKN3Q16667 212 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF730Q6ZMV8 503 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TRMT11Q7Z4G4 463 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 TMC8Q8IU68 726 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 HORMAD2Q8N7B1 307 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF431Q8TF32 576 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 SLC38A5Q8WUX1 472 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 CXorf40BQ96DE9 158 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 RIOK2Q9BVS4 552 aaKnown RBP10.59□□□□□ -0.71
PTPN7-201ENST00000309017 LINC00597Q9H2U6 94 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 PTGFRNQ9P2B2 879 aa10.59□□□□□ -0.71
PTPN7-201ENST00000309017 MAP1BP46821 2468 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms