RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MOAP1Q96BY2 351 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 C7orf34Q96L11 122 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 RDH12Q96NR8 316 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SERHL2Q9H4I8 314 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ERVMER34-1Q9H9K5 563 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 FAM60AQ9NP50 221 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 GIMAP4Q9NUV9 329 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 MS4A12Q9NXJ0 267 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 DAPP1Q9UN19 280 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ABCG2Q9UNQ0 655 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 MRPS2Q9Y399 296 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 GNGT2O14610 69 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 IFNA14P01570 189 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 CDH3P22223 829 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 GPC1P35052 558 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 IST1P53990 364 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ITGA1P56199 1179 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 C21orf59P57076 290 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 RPS26P62854 115 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PPP2R2BQ00005 443 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 RUNX2Q13950 521 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 GK3PQ14409 553 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 DEFB133Q30KQ1 61 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SLC36A3Q495N2 470 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OTUD3Q5T2D3 398 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OR2T5Q6IEZ7 315 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OR52E8Q6IFG1 317 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 REEP3Q6NUK4 255 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 TNFAIP8L2Q6P589 184 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SHQ1Q6PI26 577 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PATL1Q86TB9 770 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 STK32CQ86UX6 486 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OR2T29Q8NH02 315 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 TPD52L3Q96J77 140 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SLC35G5Q96KT7 338 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SLC38A3Q99624 504 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OSBPL10Q9BXB5 764 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 GABARAPL1Q9H0R8 117 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ZCCHC3Q9NUD5 404 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 DNAAF2Q9NVR5 837 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 THUMPD1Q9NXG2 353 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 VNN3Q9NY84 501 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PSME2Q9UL46 239 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 RAB23Q9ULC3 237 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF451Q9Y4E5 1061 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SLC22A7Q9Y694 548 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 CABIN1Q9Y6J0 2220 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 A0A1W2PS29 197 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 A6NHS1 94 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 HMGN4O00479 90 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 HCRTR1O43613 425 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 GALR3O60755 368 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 SDC3O75056 442 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 TFPTP0C1Z6 253 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 TDGF1P13385 188 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CPN2P22792 545 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 MPIP34949 423 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 FEN1P39748 380 aaKnown RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CAPGP40121 348 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 RXRGP48443 463 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 EPHA4P54764 986 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 VSX2P58304 361 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 MYBPC1Q00872 1141 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 TP53BP2Q13625 1128 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 MAPK11Q15759 364 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CSRP2Q16527 193 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 PRTGQ2VWP7 1150 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF750Q32MQ0 723 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 ZC3H12BQ5HYM0 836 aaKnown RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 BHLHB9Q6PI77 547 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM179BQ7Z7N9 219 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 HIPK1Q86Z02 1210 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 ZC3H7AQ8IWR0 971 aaKnown RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CCDC116Q8IYX3 515 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 SAMD14Q8IZD0 417 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 DNAJC22Q8N4W6 341 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 DHRSXQ8N5I4 330 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 METTL25Q8N6Q8 603 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 OR56A1Q8NGH5 318 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 MIPOL1Q8TD10 442 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 SLC38A5Q8WUX1 472 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CSF3RQ99062 836 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 RAB33BQ9H082 229 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF696Q9H7X3 374 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 UCKL1Q9NWZ5 548 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 IFT80Q9P2H3 777 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 PDP2Q9P2J9 529 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 MAGED1Q9Y5V3 778 aaPredicted RBP11.19□□□□□ -0.62
TRIM40-205ENST00000307859 CSNK1G3Q9Y6M4 447 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF780BQ9Y6R6 833 aa11.19□□□□□ -0.62
TRIM40-205ENST00000307859 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms