RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CAMK1Q14012 370 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SYPL1Q16563 259 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 MICAQ29983 383 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SLC30A6Q6NXT4 461 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SYT9Q86SS6 491 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 PDZD3Q86UT5 571 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 NKX2-4Q9H2Z4 354 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 IMP3Q9NV31 184 aaKnown RBP13.87□□□□□ -0.19
PTPN9-201ENST00000306726 I3L521 148 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 OR1F1O43749 312 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 EIF2S1P05198 315 aaKnown RBP13.87□□□□□ -0.19
PTPN9-201ENST00000306726 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
PTPN9-201ENST00000306726 ALAS2P22557 587 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SOX18P35713 384 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SLC3A1Q07837 685 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 ARL9Q6T311 187 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 TPRG1Q6ZUI0 275 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 FAM124AQ86V42 546 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SLC37A3Q8NCC5 494 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 OR5H6Q8NGV6 325 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 ZFPM2Q8WW38 1151 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 REPS1Q96D71 796 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 TMCO6Q96DC7 493 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 TMEM19Q96HH6 336 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 HRASLS5Q96KN8 279 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 NTMT1Q9BV86 223 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF224Q9NZL3 707 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 CCL26Q9Y258 94 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SPEF1Q9Y4P9 236 aa13.87□□□□□ -0.19
PTPN9-201ENST00000306726 SPEGQ15772 3267 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
PTPN9-201ENST00000306726 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 SPNS1Q9H2V7 528 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 FBXO8Q9NRD0 319 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 ZFR2Q9UPR6 939 aaKnown RBP13.86□□□□□ -0.19
PTPN9-201ENST00000306726 MYLKQ15746 1914 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 PCDH8O95206 1070 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 IFNA14P01570 189 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 JUPP14923 745 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 GPR4P46093 362 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 RPS25P62851 125 aaKnown RBP13.86□□□□□ -0.19
PTPN9-201ENST00000306726 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 P2RY14Q15391 338 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 RFPL4BQ6ZWI9 263 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 C16orf62Q7Z3J2 963 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 TRIM46Q7Z4K8 759 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 FAM9CQ8IZT9 166 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 OR51G2Q8NGK0 314 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 RAD51AP1Q96B01 352 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 TRMT2BQ96GJ1 504 aaKnown RBP13.86□□□□□ -0.19
PTPN9-201ENST00000306726 SLC6A16Q9GZN6 736 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 MAGIXQ9H6Y5 334 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 MKLN1Q9UL63 735 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 NTNG1Q9Y2I2 539 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 CMAHPQ9Y471 501 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 NEUROG3Q9Y4Z2 214 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 CSNK1G3Q9Y6M4 447 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 CLDN2P57739 230 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 TAS2R41P59536 307 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 COX10Q12887 443 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 ANXA8L1Q5VT79 327 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 OR52P1PQ8NH57 321 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 PIK3R3Q92569 461 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 NELL2Q99435 816 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 C17orf62Q9BQA9 187 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 TTLL2Q9BWV7 592 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 PRO3102Q9H379 93 aa13.86□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF334Q9HCZ1 680 aaPredicted RBP13.86□□□□□ -0.19
PTPN9-201ENST00000306726 PATJQ8NI35 1801 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PSMD9O00233 223 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 KLK8O60259 260 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 NOS1APO75052 506 aaPredicted RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ADRA2AP08913 450 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ITGA2P17301 1181 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 HTR3AP46098 478 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 METAP1P53582 386 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PFN3P60673 137 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 RING1Q06587 406 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 TATDN3Q17R31 274 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ODF4Q2M2E3 257 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ADGRD2Q7Z7M1 963 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 LRRTM4Q86VH4 590 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 CCDC116Q8IYX3 515 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PIP5K1AQ99755 562 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ZC4H2Q9NQZ6 224 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 MAGEB4O15481 346 aaPredicted RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 MMP20O60882 483 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PTTG1O95997 202 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 CD72P21854 359 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 SSR2P43308 183 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 BCL2L15Q5TBC7 163 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 FAM129CQ86XR2 697 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 IL17RDQ8NFM7 739 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 DEDD2Q8WXF8 326 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms