RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MCHR1Q99705 422 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SORBS1Q9BX66 1292 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 FARSBQ9NSD9 589 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 AIG1Q9NVV5 245 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 MKRN2OSH3BPM6 223 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 I6L893 689 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 SOX1O00570 391 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 KIF1CO43896 1103 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 FZD6O60353 706 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CSF2P04141 144 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 BCKDHBP21953 392 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 ECHS1P30084 290 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 PEX19P40855 299 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 FOXK2Q01167 660 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 MERTKQ12866 999 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 ALG1LQ6GMV1 187 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 RINLQ6ZS11 566 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 GPR141Q7Z602 305 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 YTHDF3Q7Z739 585 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 TSPEARQ8WU66 669 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CAPSLQ8WWF8 208 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 EFHD2Q96C19 240 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 POLR2J3Q9H1A7 115 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 PTBP2Q9UKA9 531 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 A0A096LPI6 279 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 SLC5A10A0PJK1 596 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 VSTM2BA6NLU5 285 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 TFECO14948 347 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 MGRN1O60291 552 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 ATP6V1G2O95670 118 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 KIR2DL1P43626 348 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 GPR3P46089 330 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 RPS9P46781 194 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 CAPZBP47756 277 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 PTGES3Q15185 160 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 DNM1P34Q6PK57 102 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 SFTPA1Q8IWL2 248 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CDRT4Q8N9R6 151 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 UCN3Q969E3 161 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 MYDGFQ969H8 173 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 BIRC8Q96P09 236 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 RBM4BQ9BQ04 359 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 ZPBPQ9BS86 351 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 RBM4Q9BWF3 364 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 SLC17A4Q9Y2C5 497 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 NUP205Q92621 2012 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CPSF4LA6NMK7 179 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 NPIPA2E9PIF3 369 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 NPIPA3F8WFD2 350 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 FANCGO15287 622 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 GPR75O95800 540 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 RAP2AP10114 183 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 DDCP20711 480 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 SRYQ05066 204 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CLCA4Q14CN2 919 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CRB2Q5IJ48 1285 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 FAM180BQ6P0A1 224 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 AAGABQ6PD74 315 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 C16orf87Q6PH81 154 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 SEC61A2Q9H9S3 476 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 NGBQ9NPG2 151 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 TET1Q8NFU7 2136 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 MICAL3Q7RTP6 2002 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 IRGMA1A4Y4 181 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 ANHXE9PGG2 379 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 G3V2L1 256 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 MAGEB3O15480 346 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 RAB38P57729 211 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 TRA2BP62995 288 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 TXNL4AP83876 142 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 SLC5A12Q1EHB4 618 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 NKAIN1Q4KMZ8 207 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 TMEM71Q6P5X7 295 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 UNQ6126/PRO20091Q6UXV3 157 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 BPHLQ86WA6 291 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 PHTF2Q8N3S3 785 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 ZNF540Q8NDQ6 660 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 AURKBQ96GD4 344 aaPredicted RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 SFXN2Q96NB2 322 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 MS4A4EQ96PG1 132 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 UTP23Q9BRU9 249 aaKnown RBP8.78□□□□□ -1
PTPRE-202ENST00000306042 ACTRT3Q9BYD9 372 aa8.78□□□□□ -1
PTPRE-202ENST00000306042 CIB4A0PJX0 185 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 BLOC1S5-TXNDC5H3BN57 136 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 KRT36O76013 467 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 NXPH1P58417 271 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 RPS26P62854 115 aaKnown RBP8.77□□□□□ -1.01
PTPRE-202ENST00000306042 EFR3AQ14156 821 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 ADRM1Q16186 407 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 LIN52Q52LA3 116 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 LCN1P1Q5VSP4 162 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM154Q6P9G4 183 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF440Q8IYI8 595 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 OR9A2Q8NGT5 310 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 OR2I1PQ8NGU4 316 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 ALG14Q96F25 216 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 MSLNLQ96KJ4 702 aa8.77□□□□□ -1.01
PTPRE-202ENST00000306042 LRRC3BQ96PB8 259 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms