RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 NDC1Q9BTX1 674 aa12.68□□□□□ -0.38
DDX54-201ENST00000306014 POLR1DQ9Y2S0 133 aa12.68□□□□□ -0.38
DDX54-201ENST00000306014 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
DDX54-201ENST00000306014 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 M0R3H8 397 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 MNDAP41218 407 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 STARP49675 285 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 BTN3A2P78410 334 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 OXA1LQ15070 435 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 SLC30A6Q6NXT4 461 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 CNKSR3Q6P9H4 555 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 SORBS1Q9BX66 1292 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 WDR26Q9H7D7 661 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 IL20RAQ9UHF4 553 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 GMFGO60234 142 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 ZNF8P17098 575 aaPredicted RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 SYN1P17600 705 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 SLC35A2P78381 396 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 MEX3DQ86XN8 651 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 FIBINQ8TAL6 211 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 OSTF1Q92882 214 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 CD180Q99467 661 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 KLF16Q9BXK1 252 aaPredicted RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 RNASET2O00584 256 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 PLD2O14939 933 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 UGDHO60701 494 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 KLHL18O94889 574 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 PRLP01236 227 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 MRPL3P09001 348 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 STOMP27105 288 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 MTNR1AP48039 350 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 AP3S2P59780 193 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 PITPNAQ00169 270 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
DDX54-201ENST00000306014 AQP6Q13520 282 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 SLC5A12Q1EHB4 618 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 AFMIDQ63HM1 303 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 VITQ6UXI7 678 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 AMIGO1Q86WK6 493 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 VMP1Q96GC9 406 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 TGFBR1P36897 503 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 EIPR1Q53HC9 387 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 RIMKLAQ8IXN7 391 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 C1orf216Q8TAB5 229 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 WDR48Q8TAF3 677 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 PSORS1C1Q9UIG5 152 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 DOCK5Q9H7D0 1870 aa12.67□□□□□ -0.38
DDX54-201ENST00000306014 FAM25EA8MYX2 175 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 HTR2BP41595 481 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ZNF791Q3KP31 576 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 TOR1AIP1Q5JTV8 583 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 POMGNT2Q8NAT1 580 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 OR56A1Q8NGH5 318 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 MYEOVQ96EZ4 313 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ERMAPQ96PL5 475 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 NTN4Q9HB63 628 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 A0A1W2PPK0 400 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 PROM1O43490 865 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ATF4P18848 351 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 DDX6P26196 483 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDX54-201ENST00000306014 ACVR2AP27037 513 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ITPKBP27987 946 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 CTSCP53634 463 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 SOWAHCQ53LP3 525 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 TMEM179BQ7Z7N9 219 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 HRASLS5Q96KN8 279 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 KATNBL1Q9H079 304 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 PFDN2Q9UHV9 154 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 TEX28O15482 410 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 SCN2BO60939 215 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 LATS1O95835 1130 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ADH5P11766 374 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
DDX54-201ENST00000306014 KDM4DQ6B0I6 523 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ZNF613Q6PF04 617 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 HSD11B1LQ7Z5J1 315 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 JAZF1Q86VZ6 243 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 CPA6Q8N4T0 437 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 CELF2-AS1Q8N7Q2 184 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 ASB15Q8WXK1 588 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms