RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 PLEKHS1Q5SXH7 462 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 ADNP2Q6IQ32 1131 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 CNIH2Q6PI25 160 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 USP30Q70CQ3 517 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 ADGRD2Q7Z7M1 963 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 CELF5Q8N6W0 485 aaKnown RBP7.56□□□□□ -1.2
NKRF-201ENST00000304449 HJURPQ8NCD3 748 aaPredicted RBP7.56□□□□□ -1.2
NKRF-201ENST00000304449 APOBEC4Q8WW27 367 aaKnown RBP7.56□□□□□ -1.2
NKRF-201ENST00000304449 HYLS1Q96M11 299 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 DOHHQ9BU89 302 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 TPT1P8Q9HAU6 139 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 ZNF334Q9HCZ1 680 aaPredicted RBP7.56□□□□□ -1.2
NKRF-201ENST00000304449 CLN6Q9NWW5 311 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 REV1Q9UBZ9 1251 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 CRLS1Q9UJA2 301 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 KLHL21Q9UJP4 597 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 TRAPPC4Q9Y296 219 aa7.56□□□□□ -1.2
NKRF-201ENST00000304449 SPIN1Q9Y657 262 aaPredicted RBP7.56□□□□□ -1.2
NKRF-201ENST00000304449 LGALS8O00214 317 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 CASKO14936 926 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 SIGLEC5O15389 551 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ENTPD6O75354 484 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 RFPL3O75679 317 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 SLCO2B1O94956 709 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 HLA-EP13747 358 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 CRATP43155 626 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 TM4SF4P48230 202 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 SIGLEC14Q08ET2 396 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PTGES3Q15185 160 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 AANATQ16613 207 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PRSS53Q2L4Q9 553 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ZNF367Q7RTV3 350 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 C9orf62Q8N4C0 152 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 LSM14AQ8ND56 463 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 DBF4BQ8NFT6 615 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ZNF461Q8TAF7 563 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ASB12Q8WXK4 309 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 TOE1Q96GM8 510 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 TCF25Q9BQ70 676 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 RBCK1Q9BYM8 510 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 NIPAL2Q9H841 368 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 BRF2Q9HAW0 419 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 FZD3Q9NPG1 666 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 NKIRAS2Q9NYR9 191 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 TRPM5Q9NZQ8 1165 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 CPNE7Q9UBL6 633 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PCDHB7Q9Y5E2 793 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 DSPPQ9NZW4 1301 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 A0A075B6Q4 140 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PCDH7O60245 1069 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ZNF30P17039 623 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 NNMTP40261 264 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 MAPK8P45983 427 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 VSX2P58304 361 aaPredicted RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 HSPA14Q0VDF9 509 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 LMAN2Q12907 356 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 TNK1Q13470 666 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 EXOSC2Q13868 293 aaKnown RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 KCNC3Q14003 757 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ZNF385BQ569K4 471 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 CLVS2Q5SYC1 327 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ZNF770Q6IQ21 691 aaPredicted RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 TMEM81Q6P7N7 255 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 XKRXQ6PP77 449 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 SERPINA13PQ6UXR4 307 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 LSRQ86X29 649 aaPredicted RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 SAMD11Q96NU1 681 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 CHIAQ9BZP6 476 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 PAK6Q9NQU5 681 aaPredicted RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 THSD1Q9NS62 852 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 FZD4Q9ULV1 537 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 MAPRE3Q9UPY8 281 aa7.55□□□□□ -1.2
NKRF-201ENST00000304449 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
NKRF-201ENST00000304449 OR5K3A6NET4 321 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 E7EQ34 232 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 SLC9A3R1O14745 358 aaPredicted RBP7.54□□□□□ -1.2
NKRF-201ENST00000304449 CFL1P23528 166 aaKnown RBP7.54□□□□□ -1.2
NKRF-201ENST00000304449 CD70P32970 193 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
NKRF-201ENST00000304449 AP1S2P56377 157 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 SMAD3P84022 425 aaKnown RBP7.54□□□□□ -1.2
NKRF-201ENST00000304449 SEMG2Q02383 582 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
NKRF-201ENST00000304449 COX20Q5RI15 118 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 MPP7Q5T2T1 576 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 LHX8Q68G74 356 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 ZNF852Q6ZMS4 543 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 RASSF6Q6ZTQ3 369 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 SHFQ7M4L6 423 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 KANSL1Q7Z3B3 1105 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 PRSS42Q7Z5A4 293 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 NAGSQ8N159 534 aa7.54□□□□□ -1.2
NKRF-201ENST00000304449 CPXM2Q8N436 756 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms