RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GLP1RP43220 463 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 ZMYND11Q15326 602 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 RTP2Q5QGT7 225 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PHC2Q8IXK0 858 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 DNAJA3Q96EY1 480 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PTCHD1Q96NR3 888 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 SRCP12931 536 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 MYF6P23409 242 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 DCKP27707 260 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 HTR6P50406 440 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 OR5T2Q8NGG2 359 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 BIRC8Q96P09 236 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 NELL2Q99435 816 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 FEVQ99581 238 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 HEXBP07686 556 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 MAP2K3P46734 347 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.33□□□□□ -0.284e-6■■■■■ 36.3
PRKCB-201ENST00000303531 SETD7Q8WTS6 366 aaKnown RBP13.33□□□□□ -0.28
PRKCB-201ENST00000303531 WDR77Q9BQA1 342 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-201ENST00000303531 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 OXSR1O95747 527 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PDSS1Q5T2R2 415 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 KLBQ86Z14 1044 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 GPR83Q9NYM4 423 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 PTGESO14684 152 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 GTF2F2P13984 249 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-201ENST00000303531 RCAN2Q14206 197 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM151AQ8N4L1 468 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 GJD2Q9UKL4 321 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 GPR89AB7ZAQ6 455 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 GPR89BP0CG08 455 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 PYCR1P32322 319 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 ACVR1BP36896 505 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 TRIB2Q92519 343 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 NPLQ9BXD5 320 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MAB21L2Q9Y586 359 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 GSTM2P28161 218 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 UGT3A2Q3SY77 523 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MAL2Q969L2 176 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 WDR92Q96MX6 357 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 STUB1Q9UNE7 303 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MVB12BQ9H7P6 319 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MEIS3P2A8K0S8 358 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 GPR4P46093 362 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 ELAVL3Q14576 367 aaKnown RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 PXYLP1Q8TE99 480 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 DOK4Q8TEW6 326 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 SPINT3P49223 89 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 HERV-K104P61576 105 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 KCTD18Q6PI47 426 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 ERVK13-1Q9NX77 482 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 CLCA1A8K7I4 914 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 NARSO43776 548 aaKnown RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 MITFO75030 526 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 GALNT1Q10472 559 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-201ENST00000303531 LRRC37A5PQ49AS3 106 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 ATG5Q9H1Y0 275 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 NOX1Q9Y5S8 564 aa13.32□□□□□ -0.28
PRKCB-201ENST00000303531 SCO2O43819 266 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 CAPN3P20807 821 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 ZFP41Q8N8Y5 198 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 KDM1BQ8NB78 822 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 MROQ9BYG7 248 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 PARPBPQ9NWS1 579 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 SETD1AO15047 1707 aaKnown RBP13.31□□□□□ -0.28
PRKCB-201ENST00000303531 RNGTTO60942 597 aaKnown RBP13.31□□□□□ -0.28
PRKCB-201ENST00000303531 RP2O75695 350 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 RBBP9O75884 186 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 LAMP1P11279 417 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 C6P13671 934 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 DRD2P14416 443 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 S100A2P29034 98 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 FNTBP49356 437 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 ZXDBP98169 803 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 RAB30Q15771 203 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 HSPA12AO43301 675 aa13.31□□□□□ -0.28
PRKCB-201ENST00000303531 EIF2S3P41091 472 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms