RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 BHLHE41Q9C0J9 482 aaPredicted RBP12.79□□□□□ -0.36
CTDP1-202ENST00000299543 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
CTDP1-202ENST00000299543 C1GALT1Q9NS00 363 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 ACER3Q9NUN7 267 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 GULP1Q9UBP9 304 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 DNAH14Q0VDD8 3507 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 GON4LQ3T8J9 2241 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 TP53BP1Q12888 1972 aaPredicted RBP12.79□□□□□ -0.36
CTDP1-202ENST00000299543 WASHC1A8K0Z3 465 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 KIAA0513O60268 411 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 ALPPL2P10696 532 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 RGS6P49758 472 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 DSTNP60981 165 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 EFR3AQ14156 821 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 BTBD16Q32M84 506 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 TCEAL5Q5H9L2 206 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 WASH2PQ6VEQ5 465 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 OR5AR1Q8NGP9 310 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 XAGE5Q8WWM1 108 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
CTDP1-202ENST00000299543 FCGR1BQ92637 280 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 C11orf24Q96F05 449 aaPredicted RBP12.79□□□□□ -0.36
CTDP1-202ENST00000299543 FCRL1Q96LA6 429 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 YIPF4Q9BSR8 244 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 CDADC1Q9BWV3 514 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 CHST8Q9H2A9 424 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 MMP27Q9H306 513 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 TAC3Q9UHF0 121 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
CTDP1-202ENST00000299543 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
CTDP1-202ENST00000299543 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 QSOX1O00391 747 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 IFNA14P01570 189 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 RHOP08100 348 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 ERVFC1P60507 584 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 IDO2Q6ZQW0 420 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 SLC46A3Q7Z3Q1 461 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 TIGD4Q8IY51 512 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 CYP4Z2PQ8N1L4 340 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 OXR1Q8N573 874 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 RASSF5Q8WWW0 418 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 C19orf43Q9BQ61 176 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 EFCAB11Q9BUY7 163 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 GABARAPL3Q9BY60 117 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 CXorf36Q9H7Y0 433 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 MCCC2Q9HCC0 563 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 SNX11Q9Y5W9 270 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 BTN3A3O00478 584 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 CHMP24386 653 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 PKLRP30613 574 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 SOX3P41225 446 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 RFX2P48378 723 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 AKR1D1P51857 326 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 CSNK2BP67870 215 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 TBCEQ15813 527 aaPredicted RBP12.78□□□□□ -0.36
CTDP1-202ENST00000299543 FNDC3BQ53EP0 1204 aaKnown RBP12.78□□□□□ -0.36
CTDP1-202ENST00000299543 ARHGAP15Q53QZ3 475 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
CTDP1-202ENST00000299543 ABI3BPQ7Z7G0 1075 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 KBTBD8Q8NFY9 601 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 DEDD2Q8WXF8 326 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 C17orf62Q9BQA9 187 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 PRR23AA6NEV1 266 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 WWP2O00308 870 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 PSMB5P28074 263 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 HTRA3P83110 453 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 NXPE4Q6UWF7 544 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 SLA2Q9H6Q3 261 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 C12orf10Q9HB07 376 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 SCML1Q9UN30 329 aa12.78□□□□□ -0.36
CTDP1-202ENST00000299543 A0A0B4J293 547 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 H7BY64 318 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 LINC01387J3KSC0 135 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 CTSAP10619 480 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 GPC1P35052 558 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 DGKGP49619 791 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 FADDQ13158 208 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 GPR50Q13585 617 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 HORMAD2Q8N7B1 307 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 RNF31Q96EP0 1072 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 PRAP1Q96NZ9 151 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 MACROD1Q9BQ69 325 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 MUTYHQ9UIF7 546 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 USP34Q70CQ2 3546 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms