RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 TEX47Q8TBZ9 253 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 KCTD7Q96MP8 289 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 GPATCH2Q9NW75 528 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 ERVW-1Q9UQF0 538 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 RPL36Q9Y3U8 105 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SEC16AO15027 2179 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 A0A1W2PQ72 361 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 TMEM189-UBE2V1I3L0A0 370 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 AKR7A2O43488 359 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 HPGDSO60760 199 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 EPHX1P07099 455 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 MRPL3P09001 348 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 CCDC58Q4VC31 144 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 GLYATL1Q969I3 302 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 RNF208Q9H0X6 261 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 ASAH2Q9NR71 780 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SZT2Q5T011 3432 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 PDPK1O15530 556 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 HOXA2O43364 376 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRKYO43930 277 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 GCM2O75603 506 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 CHRNB1P11230 501 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 GPR4P46093 362 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC6A12P48065 614 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 LIM2P55344 173 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRKCDQ05655 676 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR52P1PQ8NH57 321 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC5A11Q8WWX8 675 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 OPALINQ96PE5 141 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 MAPKAP1Q9BPZ7 522 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 TMEM45AQ9NWC5 275 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 CUEDC1Q9NWM3 386 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 BTNL2Q9UIR0 455 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 MYO16Q9Y6X6 1858 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PEPDP12955 493 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 GNG2P59768 71 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 RAE1P78406 368 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PLEKHS1Q5SXH7 462 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PLPP4Q5VZY2 271 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 OR51G2Q8NGK0 314 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SLC7A13Q8TCU3 470 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SNAPC3Q92966 411 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CSNK1G3Q9Y6M4 447 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TSC2P49815 1807 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PCCBP05166 539 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 RB1P06400 928 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 YES1P07947 543 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 C1GALT1C1LP0DN25 315 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PAICSP22234 425 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CXCR2P25025 360 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SOX18P35713 384 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TM4SF4P48230 202 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 NCBP2P52298 156 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 ID2Q02363 134 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TCTN1Q2MV58 587 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 LCN1P1Q5VSP4 162 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SLC8B1Q6J4K2 584 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 OR6F1Q8NGZ6 308 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SLC46A2Q9BY10 475 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 HHATLQ9HCP6 504 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 MRPL15Q9P015 296 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SCN4AP35499 1836 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 KCNE1BA0A087WTH5 132 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CXCL14O95715 111 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CTBP2P56545 445 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CAMK1Q14012 370 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 SMUG1Q53HV7 270 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CEP78Q5JTW2 689 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 LYPD8Q6UX82 237 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 FAM129CQ86XR2 697 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 YIPF7Q8N8F6 280 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 BEST4Q8NFU0 473 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 C11orf24Q96F05 449 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 MND1Q9BWT6 205 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 BARHL1Q9BZE3 327 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 TM7SF3Q9NS93 570 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 AHSPQ9NZD4 102 aa12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 ZFR2Q9UPR6 939 aaKnown RBP12.64□□□□□ -0.39
TNFRSF21-201ENST00000296861 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms