RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SLC38A5Q8WUX1 472 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 NCSTNQ92542 709 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 SLC35G5Q96KT7 338 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 HSPA12BQ96MM6 686 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 ZNF300Q96RE9 604 aaPredicted RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 PAPOLBQ9NRJ5 636 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 ZCCHC3Q9NUD5 404 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 SH3GLB1Q9Y371 365 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 TESMINQ9Y4I5 508 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 TRIOO75962 3097 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 LMO7DNF2Z398 122 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MITFO75030 526 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 AIFM1O95831 613 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 DCNP07585 359 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 ETS2P15036 469 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MAGP20916 626 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TTKP33981 857 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MAGEA8P43361 318 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 YAP1P46937 504 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 BTN3A2P78410 334 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 HHEXQ03014 270 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 KEAP1Q14145 624 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 C6orf141Q5SZD1 244 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 DEFB119Q8N690 84 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SMYD1Q8NB12 490 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 UTP15Q8TED0 518 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 RASSF5Q8WWW0 418 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 UCN3Q969E3 161 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TMEM19Q96HH6 336 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ZNF607Q96SK3 696 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 APOL4Q9BPW4 351 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 P2RX2Q9UBL9 471 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MUTYHQ9UIF7 546 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SNX11Q9Y5W9 270 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CACNA1IQ9P0X4 2223 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ENO4A6NNW6 628 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 H3BSA7 217 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 IFNW1P05000 195 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TFPTP0C1Z6 253 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CSNK2A2P19784 350 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 TNFRSF1BP20333 461 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PPP2R1BP30154 601 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MPIP34949 423 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 POLR2IP36954 125 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 ISL1P61371 349 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 IL5RAQ01344 420 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SPIBQ01892 262 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 KCNC4Q03721 635 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 C1orf61Q13536 156 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SUZ12Q15022 739 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 MEP1AQ16819 746 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 BROXQ5VW32 411 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SLC48A1Q6P1K1 146 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 FAHD1Q6P587 224 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ZNF773Q6PK81 442 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TMEM64Q6YI46 380 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 B3GNT6Q6ZMB0 384 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TRIM73Q86UV7 250 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TTC29Q8NA56 475 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 KCT2Q8NC54 265 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CHDHQ8NE62 594 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 FAM46DQ8NEK8 389 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 GIPC3Q8TF64 312 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 RAB8BQ92930 207 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MOAP1Q96BY2 351 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CHRNA10Q9GZZ6 450 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 SEMA6CQ9H3T2 930 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 EXD2Q9NVH0 621 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 GMPPBQ9Y5P6 360 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 LYVE1Q9Y5Y7 322 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CEPT1Q9Y6K0 416 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ZNF780BQ9Y6R6 833 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TDRD6O60522 2096 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 THADAQ6YHU6 1953 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 HMGN4O00479 90 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PGRMC2O15173 223 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PROM1O43490 865 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PRKRAO75569 313 aaKnown RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 DNAJB5O75953 348 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ZNF10P21506 573 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 CRHBPP24387 322 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 MAOBP27338 520 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
PDPN-201ENST00000294489 HNRNPKP61978 463 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDPN-201ENST00000294489 CD47Q08722 323 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ZBED5Q49AG3 693 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 OOSP2Q86WS3 158 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 CCDC116Q8IYX3 515 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 GALNT15Q8N3T1 639 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 ARL14Q8N4G2 192 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 KLHL6Q8WZ60 621 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 PROX1Q92786 737 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 FCRL4Q96PJ5 515 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 KCMF1Q9P0J7 381 aa8.63□□□□□ -1.03
PDPN-201ENST00000294489 TRPC4Q9UBN4 977 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms