RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NDOR1Q9UHB4 597 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 KIF13BQ9NQT8 1826 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 TRIP12Q14669 1992 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 A0A1W2PRQ8 180 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 DNAJB5O75953 348 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 ALPLP05186 524 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CRHBPP24387 322 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RBM34P42696 430 aaKnown RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 TBPL1P62380 186 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 SPCS2Q15005 226 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RPLP0P6Q8NHW5 317 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 STOML3Q8TAV4 291 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 THAP6Q8TBB0 222 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 GEMIN6Q8WXD5 167 aaKnown RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 DNASE1L2Q92874 299 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 UBE2FQ969M7 185 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC35G5Q96KT7 338 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 SORBS1Q9BX66 1292 aaKnown RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 OR2S2Q9NQN1 319 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 ANKMY1Q9P2S6 941 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CACNA1CQ13936 2221 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 LATO43561 262 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ENTPD6O75354 484 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 HNRNPFP52597 415 aaKnown RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC30A6Q6NXT4 461 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM145Q8NBT3 493 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 KCT2Q8NC54 265 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 RIT1Q92963 219 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 KLF16Q9BXK1 252 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 MARCH5Q9NX47 278 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 COPZ2Q9P299 210 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZFR2Q9UPR6 939 aaKnown RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 PCDHB11Q9Y5F2 797 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 DRD5P21918 477 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 C21orf33P30042 268 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 LASP1Q14847 261 aaKnown RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 NEIL3Q8TAT5 605 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 FATE1Q969F0 183 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 F2RL3Q96RI0 385 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 REEP4Q9H6H4 257 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 IGLV3-10A0A075B6K4 115 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 F5H0A9 414 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ERI3O43414 337 aaKnown RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 COQ9O75208 318 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 UPK1BO75841 260 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 FHP07954 510 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ITPKBP27987 946 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CBX5P45973 191 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 OR12D2P58182 307 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 POU4F3Q15319 338 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 C2orf27AQ580R0 203 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF551Q7Z340 670 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 C12orf76Q8N812 135 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC5A11Q8WWX8 675 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CIDECQ96AQ7 238 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CREB3L1Q96BA8 519 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 C17orf62Q9BQA9 187 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CENPOQ9BU64 300 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 DOHHQ9BU89 302 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SPATA9Q9BWV2 254 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CACNG6Q9BXT2 260 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 IL37Q9NZH6 218 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 FEZF1A0PJY2 475 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 J3QLW9 94 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 GMFGO60234 142 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 HPRP00739 348 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SERPINA3P01011 423 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF19P17023 458 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF8P17098 575 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CA5AP35218 305 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 GNALP38405 381 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CDH11P55287 796 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 EMX1Q04741 257 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 SPHARQ15513 63 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF311Q5JNZ3 666 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZFP41Q8N8Y5 198 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CD300LFQ8TDQ1 290 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 ZBED6CLQ96FA7 236 aaPredicted RBP11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 B3GNT4Q9C0J1 378 aa11.99□□□□□ -0.49
SLC6A1-201ENST00000287766 TGM5O43548 720 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 FUCA1P04066 466 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 H1F0P07305 194 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SSTR4P31391 388 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TIA1P31483 386 aaKnown RBP eCLIP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CTSCP53634 463 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 MGAT3Q09327 533 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF627Q7L945 461 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 LILRA3Q8N6C8 439 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms