RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 VN1R2Q8NFZ6 395 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 CD99L2Q8TCZ2 262 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 DHRS1Q96LJ7 313 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TMEM246Q9BRR3 403 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 C11orf54Q9H0W9 315 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ABT1Q9ULW3 272 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 SNX7Q9UNH6 387 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 CARD8Q9Y2G2 431 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CCDC182A6NF36 153 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 HMGN4O00479 90 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PLPP1O14494 284 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PDPK1O15530 556 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 LRRTM2O43300 516 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 TMCC2O75069 709 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 APOL3O95236 402 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CXCL10P02778 98 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CSF3P09919 207 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 DDCP20711 480 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 MAPK12P53778 367 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 UAP1L1Q3KQV9 507 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 FAM181AQ8N9Y4 354 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CREB3L4Q8TEY5 395 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF689Q96CS4 500 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 DIRAS2Q96HU8 199 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 TEFMQ96QE5 360 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 TBC1D14Q9P2M4 693 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SEC14L3Q9UDX4 400 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 IL36AQ9UHA7 158 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SPIN1Q9Y657 262 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 FABP12A6NFH5 140 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 K7ESM1 405 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 M0R3H8 397 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 NME6O75414 186 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 RAB36O95755 333 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 IL1AP01583 271 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CSF2P04141 144 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 WEE1P30291 646 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SSTR4P31391 388 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 CCR2P41597 374 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 KCNJ5P48544 419 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF805Q5CZA5 627 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PRAMEF14Q5SWL7 426 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 RNLSQ5VYX0 342 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PODNL1Q6PEZ8 512 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 DDX53Q86TM3 631 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 UBE2J2Q8N2K1 259 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 OR5P2Q8WZ92 322 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC7A6Q92536 515 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 MRGPRX3Q96LB0 322 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 FUZQ9BT04 418 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 BEX2Q9BXY8 128 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 LINC00597Q9H2U6 94 aa12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 DIMT1Q9UNQ2 313 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-201ENST00000286749 SCO2O43819 266 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC28A2O43868 658 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 MMP20O60882 483 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 LILRB5O75023 590 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 PDE9AO76083 593 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SDC2P34741 201 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SYPL1Q16563 259 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 PDZK1Q5T2W1 519 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 XKRXQ6PP77 449 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 OLIG3Q7RTU3 272 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 HMGN2P46Q86SG4 172 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 IRF7Q92985 503 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 UBE2E3Q969T4 207 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 EXOSC8Q96B26 276 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 MSLNLQ96KJ4 702 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 LRR1Q96L50 414 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 NRTNQ99748 197 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 HCFC1R1Q9NWW0 138 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 A4GNTQ9UNA3 340 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 B4DXG7 233 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 TBX6O95947 436 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SOD1P00441 154 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 TSPAN19P0C672 248 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 CPEP16870 476 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 RPS25P62851 125 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 LSM11P83369 360 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 HOXC5Q00444 222 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 CNTN1Q12860 1018 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 GINS1Q14691 196 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 PYDC2Q56P42 97 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 OR2G6Q5TZ20 316 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms