RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LIN28AQ9H9Z2 209 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 KLHL1Q9NR64 748 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
CD44-204ENST00000279452 BCAP29Q9UHQ4 241 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ERVK-11Q9UQG0 969 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PCM1Q15154 2024 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PKD1L2Q7Z442 2459 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 FER1L5A0AVI2 2057 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 MDC1Q14676 2089 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 HEATR5BQ9P2D3 2071 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 TPRP12270 2363 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 TRAV17A0A0B4J275 112 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SERTM1A2A2V5 107 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 HRKO00198 91 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 LSM1O15116 133 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 ITGA10O75578 1167 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SASH3O75995 380 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 OR2J2O76002 312 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SNUPNO95149 360 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 JUNP05412 331 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 FGF4P08620 206 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 CD46P15529 392 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SDC1P18827 310 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 DDCP20711 480 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SSTR4P31391 388 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 GPC1P35052 558 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 HPCAL1P37235 193 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 GSTM5P46439 218 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 CYB561P49447 251 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SSR4P51571 173 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 GPR143P51810 404 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 NCBP2P52298 156 aaKnown RBP eCLIP6.08□□□□□ -1.44
CD44-204ENST00000279452 PPP2R2AP63151 447 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 RNF4P78317 190 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 IGLV3-21P80748 117 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 TLE1Q04724 770 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 TUBA3CQ13748 450 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 OR1C1Q15619 314 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 LTB4RQ15722 352 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 NNATQ16517 81 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 RFTN2Q52LD8 501 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 PRR30Q53SZ7 412 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 CES4AQ5XG92 561 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 ANKRD26P1Q6NSI1 321 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 FAM180AQ6UWF9 173 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 IGFL3Q6UXB1 125 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 C16orf47Q6ZP98 133 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 IKBIPQ70UQ0 350 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 CCDC116Q8IYX3 515 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 FAM9CQ8IZT9 166 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 VWA5B2Q8N398 1253 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 LIX1Q8N485 282 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 HORMAD2Q8N7B1 307 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 APCDD1LQ8NCL9 501 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 NFAM1Q8NET5 270 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 ADCY4Q8NFM4 1077 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 OR5L2Q8NGL0 311 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 OR9A2Q8NGT5 310 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 FAM76AQ8TAV0 307 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SLC22A8Q8TCC7 542 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 ASB15Q8WXK1 588 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 PPCDCQ96CD2 204 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SENP5Q96HI0 755 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 MAGED4Q96JG8 741 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 LMF1Q96S06 567 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 CCT7Q99832 543 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 C20orf27Q9GZN8 174 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 MYNNQ9NPC7 610 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 INTS9Q9NV88 658 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 PNPOQ9NVS9 261 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 LRFN1Q9P244 771 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 HEY2Q9UBP5 337 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 BAIAP2L1Q9UHR4 511 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 ZNF223Q9UK11 482 aaPredicted RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 EIF3LQ9Y262 564 aaKnown RBP6.08□□□□□ -1.44
CD44-204ENST00000279452 TMED5Q9Y3A6 229 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 CLDN16Q9Y5I7 305 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 AHCTF1Q8WYP5 2266 aa6.08□□□□□ -1.44
CD44-204ENST00000279452 SPTBP11277 2137 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CACNA1BQ00975 2339 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 GOLGA8QA0A0J9YX86 632 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 C2orf92A0A1B0GVN3 265 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 GOLGA8OA6NCC3 632 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 A8MVJ9 347 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 GOLGA8NF8WBI6 632 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 PDPK1O15530 556 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SUV39H1O43463 412 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 PRKNO60260 465 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 VPS4BO75351 444 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SLC25A12O75746 678 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 DDAH2O95865 285 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CT62P0C5K7 136 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 BCKDHAP12694 445 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms