RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RASA2Q15283 850 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ZNF750Q32MQ0 723 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 CCNYL2Q5T2Q4 361 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 NDUFAF5Q5TEU4 345 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 GPRIN3Q6ZVF9 776 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 PAGE2Q7Z2X7 111 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 SPPL2CQ8IUH8 684 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 SLC22A9Q8IVM8 553 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ZFP62Q8NB50 900 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-201ENST00000275036 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 CNPPD1Q9BV87 410 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 AHSPQ9NZD4 102 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 DCDC2Q9UHG0 476 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ERVK-19Q9WJR5 959 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 PRSS44E7EML9 344 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 UBFD1O14562 309 aaKnown RBP13.34□□□□□ -0.27
HMGN3-201ENST00000275036 OR10H2O60403 315 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 GLRA3O75311 464 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 CT62P0C5K7 136 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 MAPK12P53778 367 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 SLC37A1P57057 533 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 RBPJQ06330 500 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 ASPHQ12797 758 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 LCP2Q13094 533 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 PIGGQ5H8A4 983 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 LYPD8Q6UX82 237 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 ZYG11AQ6WRX3 759 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 MRGPRGQ86SM5 289 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 GPALPP1Q8IXQ4 340 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
HMGN3-201ENST00000275036 OR5L2Q8NGL0 311 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 METTL6Q8TCB7 284 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 RIT1Q92963 219 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
HMGN3-201ENST00000275036 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 CES1P1Q9UKY3 287 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 TIMM22Q9Y584 194 aa13.34□□□□□ -0.27
HMGN3-201ENST00000275036 FBN2P35556 2912 aa13.33□□□□□ -0.27
HMGN3-201ENST00000275036 DCHS2Q6V1P9 2916 aa13.33□□□□□ -0.27
HMGN3-201ENST00000275036 PKDREJQ9NTG1 2253 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 LRBAP50851 2863 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 G3V3Y1 287 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 ADAM10O14672 748 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 HS6ST1O60243 411 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 PLIN3O60664 434 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 KRT15P19012 456 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 PIK3R1P27986 724 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 SSTR4P31391 388 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 GALNSP34059 522 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 CRHR1P34998 444 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 XKP51811 444 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 FOXA1P55317 472 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
HMGN3-201ENST00000275036 DUSP2Q05923 314 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
HMGN3-201ENST00000275036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
HMGN3-201ENST00000275036 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 AGAP11Q8TF27 550 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 CHTF18Q8WVB6 975 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGN3-201ENST00000275036 ART5Q96L15 291 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 ENTPD4Q9Y227 616 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 PCDHA9Q9Y5H5 950 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 HRH3Q9Y5N1 445 aa13.33□□□□□ -0.28
HMGN3-201ENST00000275036 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
HMGN3-201ENST00000275036 TFECO14948 347 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-201ENST00000275036 DYRK3O43781 588 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 ULK1O75385 1050 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 ESRRBO95718 433 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 MLYCDO95822 493 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 KRT6AP02538 564 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 KRT6BP04259 564 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 CCL3P10147 92 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 MYL2P10916 166 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 HSD3B1P14060 373 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 CPMP14384 443 aa13.32□□□□□ -0.28
HMGN3-201ENST00000275036 HSD3B2P26439 372 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms