RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PLIN5Q00G26 463 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 TLR1Q15399 786 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 MAPRE2Q15555 327 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 ANXA8L1Q5VT79 327 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 FAAH2Q6GMR7 532 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 ANKRD37Q7Z713 158 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 ZNF248Q8NDW4 579 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 METTL21AQ8WXB1 218 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 NACC2Q96BF6 587 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 MESP1Q9BRJ9 268 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 PELOQ9BRX2 385 aaKnown RBP16.1■□□□□ 0.17
SKP2-201ENST00000274254 EFHD1Q9BUP0 239 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 SLC25A23Q9BV35 468 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 CCDC86Q9H6F5 360 aaKnown RBP16.1■□□□□ 0.17
SKP2-201ENST00000274254 HS3ST3B1Q9Y662 390 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 MRPS18BQ9Y676 258 aaKnown RBP16.1■□□□□ 0.17
SKP2-201ENST00000274254 CELSR3Q9NYQ7 3312 aa16.1■□□□□ 0.17
SKP2-201ENST00000274254 A0A1W2PQ72 361 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 A0A1W2PRB8 838 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 EFNA1P20827 205 aaPredicted RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 NCBP2P52298 156 aaKnown RBP eCLIP16.09■□□□□ 0.176e-8■□□□□ 11
SKP2-201ENST00000274254 IL10RAQ13651 578 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 TERF2Q15554 542 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 TRPM8Q7Z2W7 1104 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 VASH2Q86V25 355 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 SNX32Q86XE0 403 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 CLECL1Q8IZS7 167 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 VPS37AQ8NEZ2 397 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 RP9Q8TA86 221 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 PSMA8Q8TAA3 256 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 KCNE4Q8WWG9 221 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 PPWD1Q96BP3 646 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 RBM18Q96H35 190 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 CCDC115Q96NT0 180 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 DGAT2Q96PD7 388 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ADAP2Q9NPF8 381 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 SERHLQ9NQF3 203 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 BTNL2Q9UIR0 455 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ERVK-11Q9UQG0 969 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 OR10H2O60403 315 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 CREG1O75629 220 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 KRT34O76011 436 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 IFNA16P05015 189 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 PRDX6P30041 224 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 SOX18P35713 384 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 MANFP55145 182 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 LRRC74AQ0VAA2 488 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 CYLC2Q14093 348 aaPredicted RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 ELAVL1Q15717 326 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 PRICKLE4Q2TBC4 344 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 DGAT2L6Q6ZPD8 337 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ZNF551Q7Z340 670 aaPredicted RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 CPEB2Q7Z5Q1 589 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 PPP1R32Q7Z5V6 425 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ANKRD46Q86W74 232 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 OR9A2Q8NGT5 310 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ZFP28Q8NHY6 868 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ZNF675Q8TD23 568 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ADAMTS17Q8TE56 1095 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 OR5P2Q8WZ92 322 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 NAF1Q96HR8 494 aaKnown RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 DPH1Q9BZG8 443 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 CXorf21Q9HAI6 301 aa16.09■□□□□ 0.17
SKP2-201ENST00000274254 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 C19orf25Q9UFG5 118 aaPredicted RBP16.09■□□□□ 0.17
SKP2-201ENST00000274254 FBP2O00757 339 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 SOCS6O14544 535 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 C6orf47O95873 294 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 COX4I1P13073 169 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 PTGER1P34995 402 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 OR4D2P58180 307 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 HBA1P69905 142 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 MGAT2Q10469 447 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 KRT72Q14CN4 511 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 LTB4RQ15722 352 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 MAPKAPK3Q16644 382 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 SFT2D3Q587I9 215 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 ZNF628Q5EBL2 1059 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 KIRREL2Q6UWL6 708 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 POU5F2Q8N7G0 328 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 PTPMT1Q8WUK0 201 aaPredicted RBP16.08■□□□□ 0.16
SKP2-201ENST00000274254 GTF2H4Q92759 462 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 RIT1Q92963 219 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 C8orf44Q96CB5 159 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 CTHRC1Q96CG8 243 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 CMTM5Q96DZ9 223 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 WDR77Q9BQA1 342 aaPredicted RBP16.08■□□□□ 0.16
SKP2-201ENST00000274254 TRIM4Q9C037 500 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 RMND5AQ9H871 391 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 NEUROD4Q9HD90 331 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 PNO1Q9NRX1 252 aaKnown RBP16.08■□□□□ 0.16
SKP2-201ENST00000274254 MAN2B2Q9Y2E5 1009 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 NDUFAF1Q9Y375 327 aa16.08■□□□□ 0.16
SKP2-201ENST00000274254 FRYQ5TBA9 3013 aa16.07■□□□□ 0.16
SKP2-201ENST00000274254 BBIP1A8MTZ0 92 aa16.07■□□□□ 0.16
SKP2-201ENST00000274254 IFI6P09912 130 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms