RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 TMEM107Q6UX40 140 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 SZRD1Q7Z422 152 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF438Q7Z4V0 828 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF605Q86T29 641 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 OOSP2Q86WS3 158 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 SLC44A2Q8IWA5 706 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 GPR32P1Q8NGA4 272 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MIPOL1Q8TD10 442 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 NCSTNQ92542 709 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 HDAC2Q92769 488 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MOAP1Q96BY2 351 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 CDX2Q99626 313 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 TREX2Q9BQ50 279 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 GIMAP4Q9NUV9 329 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 DDX18Q9NVP1 670 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 P2RX2Q9UBL9 471 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 PHF11Q9UIL8 331 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MRPS2Q9Y399 296 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ENPP4Q9Y6X5 453 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 GOLGA4Q13439 2230 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 B4DGG1 531 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 J3KTA2 159 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 B4GAT1O43505 415 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 DNAJB6O75190 326 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 UGT2B11O75310 529 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 PDE9AO76083 593 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 FHP07954 510 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 CD38P28907 300 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 RYKP34925 604 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 BUD31P41223 144 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 CLK3P49761 638 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 KHKP50053 298 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 KEAP1Q14145 624 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 SYPL1Q16563 259 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 RBM48Q5RL73 367 aaKnown RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 BHLHB9Q6PI77 547 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ABHD13Q7L211 337 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 IQCHQ86VS3 1027 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 GJD3Q8N144 294 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ATG16L2Q8NAA4 619 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 OR56A1Q8NGH5 318 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 OR9A2Q8NGT5 310 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 RERGQ96A58 199 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-201ENST00000269318 TMIGD2Q96BF3 282 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 SHDQ96IW2 340 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 MAGED4Q96JG8 741 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 PIP5K1AQ99755 562 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 KRT84Q9NSB2 600 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 TMEM74BQ9NUR3 256 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 EXD2Q9NVH0 621 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 POMT2Q9UKY4 750 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 PSME2Q9UL46 239 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 DAPP1Q9UN19 280 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF780BQ9Y6R6 833 aa15.67■□□□□ 0.1
CCDC40-201ENST00000269318 ZSCAN9O15535 394 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 B3GALT2O43825 422 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 SLC28A2O43868 658 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 HMGN2P05204 90 aaKnown RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 FESP07332 822 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 IL7RP16871 459 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 ALOX12P18054 663 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CRHBPP24387 322 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 LIMS1P48059 325 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 PRKAG1P54619 331 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 SPIBQ01892 262 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 KCNC4Q03721 635 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 RAPSNQ13702 412 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 MEP1AQ16819 746 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 MANEAQ5SRI9 462 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 C6orf141Q5SZD1 244 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 SIX5Q8N196 739 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 XAGE5Q8WWM1 108 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 ELP4Q96EB1 424 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CSF3RQ99062 836 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 NELL2Q99435 816 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 TSC22D3Q99576 134 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 RIBC2Q9H4K1 309 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 PRDM9Q9NQV7 894 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 KIF17Q9P2E2 1029 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 FBXL21Q9UKT6 434 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 GPC6Q9Y625 555 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CEPT1Q9Y6K0 416 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 EMC8O43402 210 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 IFNW1P05000 195 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 TYRP1P17643 537 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 RHCEP18577 417 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CPN2P22792 545 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 MAOBP27338 520 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 MC3RP41968 323 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 RPS6KA3P51812 740 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 HMGA2P52926 109 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 CDH12P55289 794 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 TPD52P55327 224 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 RACK1P63244 317 aaKnown RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 FUT5Q11128 374 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 LASP1Q14847 261 aaKnown RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 GIPC3Q8TF64 312 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 SEMA6CQ9H3T2 930 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms