RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 LINC00862A6NCI5 91 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 WWP2O00308 870 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SH3BGRLO75368 114 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SDC1P18827 310 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ABRQ12979 859 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 IER5LQ5T953 404 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NELL1Q92832 810 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CDCA4Q9BXL8 241 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PPIL1Q9Y3C6 166 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ALG5Q9Y673 324 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TBC1D3BA6NDS4 549 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SUV39H1O43463 412 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CLDN9O95484 217 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TP53P04637 393 aaPredicted RBP15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DGKEP52429 567 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RHAGQ02094 409 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RUNX1T1Q06455 604 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ADAM15Q13444 863 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GALEQ14376 348 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GLYR1Q49A26 553 aaPredicted RBP15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PDZK1Q5T2W1 519 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SAXO2Q658L1 398 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 C9orf43Q8TAL5 461 aaPredicted RBP15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ENKURQ8TC29 256 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SELENOMQ8WWX9 145 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 FAM83CQ9BQN1 747 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SPATA9Q9BWV2 254 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GTPBP2Q9BX10 602 aaKnown RBP15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ZC4H2Q9NQZ6 224 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MCUBQ9NWR8 336 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ING3Q9NXR8 418 aa15.17■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SOX1O00570 391 aaPredicted RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PLA2G10O15496 165 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PRAMEF4O60810 478 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HIST1H2AGP0C0S8 130 aaPredicted RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CISD3P0C7P0 127 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 EBLN1P0CF75 366 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GPX2P18283 190 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HIST1H2ADP20671 130 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KIR3DL1P43629 444 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 B2MP61769 119 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PRAMEF9Q5VWM5 478 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ERICH5Q6P6B1 374 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CLECL1Q8IZS7 167 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OR9Q2Q8NGE9 314 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 APIPQ96GX9 242 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HIST1H2AHQ96KK5 128 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MRGPRX3Q96LB0 322 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HIST1H2AJQ99878 128 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 H2AFJQ9BTM1 129 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NTMT1Q9BV86 223 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 EBPLQ9BY08 206 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC32A1Q9H598 525 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TCF20Q9UGU0 1960 aaKnown RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 FABP12A6NFH5 140 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MAGEB17A8MXT2 336 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OPN1SWP03999 348 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TIMP2P16035 220 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CPN2P22792 545 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OR1E2P47887 323 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PXNP49023 591 aaPredicted RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CDH12P55289 794 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 POLR2LP62875 67 aaKnown RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ZMYND11Q15326 602 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DUOXA1Q1HG43 343 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PLET1Q6UQ28 207 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ARSKQ6UWY0 536 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 Q7L0L9 218 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ASB11Q8WXH4 323 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TESCQ96BS2 214 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DIRAS2Q96HU8 199 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 WDFY2Q96P53 400 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RDH14Q9HBH5 336 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TRPS1Q9UHF7 1281 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 COLQQ9Y215 455 aaPredicted RBP15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PLXNB3Q9ULL4 1909 aa15.16■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC35F4A4IF30 521 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LAMP2P13473 410 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GPC1P35052 558 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PREPP48147 710 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SEC13P55735 322 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 POU4F3Q15319 338 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 C16orf62Q7Z3J2 963 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PHC2Q8IXK0 858 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LGI4Q8N135 537 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CHCHD4Q8N4Q1 142 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LMNTD1Q8N9Z9 388 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DNAJA4Q8WW22 397 aaPredicted RBP15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 APOLD1Q96LR9 279 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DCLRE1CQ96SD1 692 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 WRAP53Q9BUR4 548 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TRAF4Q9BUZ4 470 aaPredicted RBP15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 S1PR5Q9H228 398 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PPIL3Q9H2H8 161 aaKnown RBP15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MIXL1Q9H2W2 232 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NDUFAF4Q9P032 175 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CLEC2DQ9UHP7 191 aa15.15■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SCML1Q9UN30 329 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms