RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 PDZD3Q86UT5 571 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 RBM45Q8IUH3 476 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 KRT78Q8N1N4 520 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 NANOGP1Q8N7R0 232 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 OR5AR1Q8NGP9 310 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 RAD51AP1Q96B01 352 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TRMT61AQ96FX7 289 aaKnown RBP11.8□□□□□ -0.52
BEST3-201ENST00000266661 COX14Q96I36 57 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 NRTNQ99748 197 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CCDC32Q9BV29 185 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 HOXD1Q9GZZ0 328 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 RACGAP1Q9H0H5 632 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 NT5DC2Q9H857 520 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 MIEF1Q9NQG6 463 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 AHSPQ9NZD4 102 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 CLEC2DQ9UHP7 191 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 POU2F3Q9UKI9 436 aa11.8□□□□□ -0.52
BEST3-201ENST00000266661 TRIOO75962 3097 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 PNMA8CA0A1B0GUJ8 204 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 MUC22E2RYF6 1773 aaPredicted RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 H3BQ06 376 aaPredicted RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 RTCAO00442 366 aaKnown RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 SNPHO15079 494 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 HOXC11O43248 304 aaPredicted RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 CSO75390 466 aaKnown RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 PRNPP04156 253 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 HBQ1P09105 142 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 EPCAMP16422 314 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 WEE1P30291 646 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 TNFSF8P32971 234 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 RPS19P39019 145 aaKnown RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 CASP3P42574 277 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 GPR1P46091 355 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 GAS1P54826 345 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 REEP5Q00765 189 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
BEST3-201ENST00000266661 HYAL1Q12794 435 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 RPA4Q13156 261 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 MLC1Q15049 377 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 MFSD4BQ5TF39 518 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 ETFBKMTQ8IXQ9 262 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 KLHL6Q8WZ60 621 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 SMPDL3AQ92484 453 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 IL4I1Q96RQ9 567 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 MIR1-1HGQ9H1L0 117 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 TAS2R7Q9NYW3 318 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 EHD3Q9NZN3 535 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 SLC23A2Q9UGH3 650 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 TBC1D24Q9ULP9 559 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 PLAGL1Q9UM63 463 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
BEST3-201ENST00000266661 TCF20Q9UGU0 1960 aaKnown RBP11.79□□□□□ -0.52
BEST3-201ENST00000266661 A0A1W2PPV9 198 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 CAPN5O15484 640 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 PDPK1O15530 556 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TMPRSS11DO60235 418 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 EPPINO95925 133 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 H1F0P07305 194 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 ALOX12P18054 663 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 CD72P21854 359 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SOX6P35712 828 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DGKEP52429 567 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 MAPK12P53778 367 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 KRR1Q13601 381 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 TP53BP2Q13625 1128 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ARHGAP19Q14CB8 494 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 GAB4Q2WGN9 574 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DCST1Q5T197 706 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 RAET1GQ6H3X3 334 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DCUN1D3Q8IWE4 304 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TAGAPQ8N103 731 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 FAM26EQ8N5C1 309 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TBC1D19Q8N5T2 526 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 PROKR2Q8NFJ6 384 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 OR8J1Q8NGP2 316 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SLC7A13Q8TCU3 470 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 RAB8BQ92930 207 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 OR2A14Q96R47 310 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ASPNQ9BXN1 380 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ROGDIQ9GZN7 287 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 NEUROD4Q9HD90 331 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 C11orf16Q9NQ32 467 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ACSS1Q9NUB1 689 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 CUEDC1Q9NWM3 386 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 SNX11Q9Y5W9 270 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SNX8Q9Y5X2 465 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 V9GYH0 126 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms