RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 OR52E4Q8NGH9 312 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 OR4K3Q96R72 315 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 MCHR1Q99705 422 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SIP14410 1827 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SRPX2O60687 465 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TRIM23P36406 574 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 CLCN2P51788 898 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TRA2BP62995 288 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 ST3GAL3Q11203 375 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 MAPKAP1Q9BPZ7 522 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 TCEAL2Q9H3H9 227 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 N6AMT1Q9Y5N5 214 aa13.71□□□□□ -0.21
PDLIM2-201ENST00000265810 LOC100506127A0A0U1RQW1 187 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 IFNGP01579 166 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 LINGO3P0C6S8 592 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 IL12AP29459 219 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 SHISA6Q6ZSJ9 500 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 AHSA2Q719I0 299 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 TMEM156Q8N614 296 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 SH3YL1Q96HL8 342 aaPredicted RBP13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 GMPR2Q9P2T1 348 aaKnown RBP13.71□□□□□ -0.22
PDLIM2-201ENST00000265810 ELOA3DA6NLF2 546 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 AIFM1O95831 613 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 MED22Q15528 200 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ATP6AP1Q15904 470 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ELOA3BQ3SY89 546 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 CLEC12AQ5QGZ9 265 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 RNF111Q6ZNA4 994 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 AQP11Q8NBQ7 271 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ELOA3Q8NG57 546 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 OR5D16Q8NGK9 328 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 CHTF18Q8WVB6 975 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 CHST10O43529 356 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ALDH3A2P51648 485 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 SLC5A12Q1EHB4 618 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 PELOQ9BRX2 385 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 OR5K3A6NET4 321 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 OR1D4P47884 311 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 OR1D5P58170 312 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 RPS26P11Q5JNZ5 115 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 CHMP1BQ7LBR1 199 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 OR52P1PQ8NH57 321 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 C1GALT1Q9NS00 363 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 ADAM29Q9UKF5 820 aa13.7□□□□□ -0.22
PDLIM2-201ENST00000265810 A0A1W2PQF6 199 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 PLPP1O14494 284 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 PRKRAO75569 313 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 CLIC3O95833 236 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 GRK6P43250 576 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 ITGA1P56199 1179 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 SUN3Q8TAQ9 357 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 BMFQ96LC9 184 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 AGAP14A8MT82 685 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 CDKN2CP42773 168 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 PDSS2Q86YH6 399 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 OR8J2Q8NGG1 315 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 TANKQ92844 425 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 ACTRT3Q9BYD9 372 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 SEMA6CQ9H3T2 930 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 MKKSQ9NPJ1 570 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 IFT52Q9Y366 437 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 AP1M2Q9Y6Q5 423 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 BCL10O95999 233 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 TIAL1Q01085 375 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 WDR53Q7Z5U6 358 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 EHD3Q9NZN3 535 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 KLRF1Q9NZS2 232 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 PAPLNO95428 1278 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 FADS2O95864 444 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 FURINP09958 794 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 TTKP33981 857 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 IST1P53990 364 aa13.69□□□□□ -0.22
PDLIM2-201ENST00000265810 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms