RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MAP10Q9P2G4 905 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 PCDHGA9Q9Y5G4 932 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 PCDHA9Q9Y5H5 950 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 A0A1W2PQ72 361 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 C1orf226A1L170 272 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 WWP2O00308 870 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLC28A1O00337 649 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 WDPCPO95876 746 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 FGF4P08620 206 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CPMP14384 443 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 COX7A2P14406 83 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ALOX15P16050 662 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 EPHA3P29320 983 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 SERPINB5P36952 375 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 STT3AP46977 705 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 RPL14P50914 215 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ARG2P78540 354 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 EXOSC7Q15024 291 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 FAM111BQ6SJ93 734 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ISLR2Q6UXK2 745 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 LIX1Q8N485 282 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 RBMXL3Q8N7X1 1067 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 OR4K14Q8NGD5 310 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 OR9A2Q8NGT5 310 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF75CPQ92670 426 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 KAT2AQ92830 837 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 TANKQ92844 425 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 HES7Q9BYE0 225 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 DEFB126Q9BYW3 111 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 ADNPQ9H2P0 1102 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 CDCP1Q9H5V8 836 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 WDR55Q9H6Y2 383 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 PSD3Q9NYI0 1048 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 VTI1BQ9UEU0 232 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 EXO1Q9UQ84 846 aaKnown RBP6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
DEPDC1B-201ENST00000265036 SNNO75324 88 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 FLNBO75369 2602 aaKnown RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 DDAH2O95865 285 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 BCKDHAP12694 445 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ARFIP1P53367 373 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 DIO3P55073 304 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 OCRLQ01968 901 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 OC90Q02509 493 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 EXT1Q16394 746 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ACER2Q5QJU3 275 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 C6orf136Q5SQH8 315 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ABHD17BQ5VST6 288 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 GALNT18Q6P9A2 607 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 TMEM64Q6YI46 380 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ST13P4Q8IZP2 240 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 KRTCAP2Q8N6L1 136 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 LRRC8CQ8TDW0 803 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ELP5Q8TE02 316 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 DAZLQ92904 295 aaKnown RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 RIT1Q92963 219 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 CIDECQ96AQ7 238 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 MAGED4Q96JG8 741 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 FAIM2Q9BWQ8 316 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ACBD3Q9H3P7 528 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 EPS8L2Q9H6S3 715 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLAMF7Q9NQ25 335 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 KLHL1Q9NR64 748 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 CES1P1Q9UKY3 287 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 HECTD1Q9ULT8 2610 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 DTX4Q9Y2E6 619 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 POLEQ07864 2286 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 FREM3P0C091 2139 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 GABRR3A8MPY1 467 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF354AO60765 605 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SOX11P35716 441 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 CLCN2P51788 898 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 IGLV3-21P80748 117 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 PMP22Q01453 160 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 HSPB3Q12988 150 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SERTAD2Q14140 314 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 HEPACAMQ14CZ8 416 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ZNF385BQ569K4 471 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 ATG16L1Q676U5 607 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 NXNQ6DKJ4 435 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SZRD1Q7Z422 152 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 MAVSQ7Z434 540 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 WDR53Q7Z5U6 358 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 C9orf40Q8IXQ3 194 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SLC5A8Q8N695 610 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 OR14A16Q8NHC5 309 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 VMP1Q96GC9 406 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 SENP5Q96HI0 755 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 EPN3Q9H201 632 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 AKTIPQ9H8T0 292 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 CXorf21Q9HAI6 301 aa6.74□□□□□ -1.33
DEPDC1B-201ENST00000265036 MMP25Q9NPA2 562 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms