RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 HGDQ93099 445 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SCMH1Q96GD3 660 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 COQ10AQ96MF6 247 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 TMEM175Q9BSA9 504 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 POLMQ9NP87 494 aaPredicted RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 ENOPH1Q9UHY7 261 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SNX11Q9Y5W9 270 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 OR6C75A6NL08 312 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 ZAR1LA6NP61 321 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 IQCF5A8MTL0 148 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 KPNA5O15131 536 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 GMDSO60547 372 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 HRGP04196 525 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 RHOCP08134 193 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 ANXA5P08758 320 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 ZDHHC11BP0C7U3 371 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 TNFRSF1BP20333 461 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 PRPS1L1P21108 318 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 MAOBP27338 520 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 POU1F1P28069 291 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 KIR3DL1P43629 444 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP54-201ENST00000264883 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 TAF10Q12962 218 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CAMK2DQ13557 499 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 PLA1AQ53H76 456 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 RASSF6Q6ZTQ3 369 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 USP30Q70CQ3 517 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 RRM2BQ7LG56 351 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SYNPOQ8N3V7 929 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SYT14Q8NB59 555 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 LINC01599Q8WXQ3 324 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 C12orf57Q99622 126 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 NOSIPQ9Y314 301 aaKnown RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 A8MVJ9 347 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 MAGEB17A8MXT2 336 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 AP1S2P56377 157 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 CTBP2P56545 445 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 C6orf132Q5T0Z8 1188 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 TMIGD1Q6UXZ0 262 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ZNF783Q6ZMS7 281 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 MACC1Q6ZN28 852 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 GPR155Q7Z3F1 870 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 KCT2Q8NC54 265 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 OR2T4Q8NH00 348 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 TM9SF4Q92544 642 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 MYEOVQ96EZ4 313 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 FAM193BQ96PV7 902 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 NPAS1Q99742 590 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 DPYSL5Q9BPU6 564 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 APOL5Q9BWW9 433 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 GPR63Q9BZJ6 419 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ABCG8Q9H221 673 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 SLC32A1Q9H598 525 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 FAM120CQ9NX05 1096 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 DNAJC27Q9NZQ0 273 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 HCN3Q9P1Z3 774 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ZFP37Q9Y6Q3 630 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 GLYATL1P3A0A0U1RQE8 302 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 FAM170BA6NMN3 283 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 PRSS44E7EML9 344 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 H3BNC9 293 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 LALBAP00709 142 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 NUDT7P0C024 238 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 CPEP16870 476 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 TACR1P25103 407 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 AVPR1BP47901 424 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 AKR1D1P51857 326 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 LBX1P52954 281 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 CRISP1P54107 249 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ADAM15Q13444 863 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 GPNMBQ14956 572 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 LAS2Q8IYD9 372 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 BCL7CQ8WUZ0 217 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 POF1BQ8WVV4 589 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 SELENOMQ8WWX9 145 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms