RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FXYD1O00168 92 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 BTN3A3O00478 584 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 ZNF749O43361 778 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 ETHE1O95571 254 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 NPPAP01160 153 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CHRM5P08912 532 aaPredicted RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 SDC1P18827 310 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 POLR2CP19387 275 aaPredicted RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 CDH3P22223 829 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CXCR2P25025 360 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CCR8P51685 355 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 SMSP52788 366 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CLNS1AP54105 237 aaKnown RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 RPS13P62277 151 aaKnown RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 PHEXP78562 749 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 REEP5Q00765 189 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CEACAM7Q14002 265 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 KIR2DS3Q14952 304 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 ZNF385CQ66K41 422 aaPredicted RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 NOXRED1Q6NXP6 359 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
SGCA-201ENST00000262018 TMIGD1Q6UXZ0 262 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 CARFQ8N187 725 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 OR1N1Q8NGS0 311 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 OR2Y1Q8NGV0 311 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 VPS33AQ96AX1 596 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 SLC22A18Q96BI1 424 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 AIF1LQ9BQI0 150 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 RHBGQ9H310 441 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 SPAG4Q9NPE6 437 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 DMRT3Q9NQL9 472 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 NMRK1Q9NWW6 199 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 ABCD2Q9UBJ2 740 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 NDOR1Q9UHB4 597 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 ADGRE2Q9UHX3 823 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 POMT2Q9UKY4 750 aa12.5□□□□□ -0.41
SGCA-201ENST00000262018 FAM221AA4D161 298 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 PRMT3O60678 531 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 MYO1DO94832 1006 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 PSMG1O95456 288 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 CLDN14O95500 239 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 HBQ1P09105 142 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 ME2P23368 584 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 PSMB5P28074 263 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 SERPINB1P30740 379 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 C21orf58P58505 322 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 PRDX1Q06830 199 aaKnown RBP12.49□□□□□ -0.41
SGCA-201ENST00000262018 ACSM2AQ08AH3 577 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 NFYCQ13952 458 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 CDSNQ15517 529 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 SPATS1Q496A3 300 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TIGD2Q4W5G0 525 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 ACSM2BQ68CK6 577 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 LINC00696Q6ZRV3 163 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TGIF2LYQ8IUE0 185 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TMEM151BQ8IW70 566 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 RIMKLAQ8IXN7 391 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
SGCA-201ENST00000262018 OR2A1Q8NGT9 310 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TESCQ96BS2 214 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 TAAR6Q96RI8 345 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 ACAT2Q9BWD1 397 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 VCX3BQ9H321 246 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 SLC6A20Q9NP91 592 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 ACTR10Q9NZ32 417 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 STX18Q9P2W9 335 aaKnown RBP12.49□□□□□ -0.41
SGCA-201ENST00000262018 CD300AQ9UGN4 299 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 CCDC88CQ9P219 2028 aa12.49□□□□□ -0.41
SGCA-201ENST00000262018 PRRC2AP48634 2157 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 ISM1B1AKI9 464 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 IL6P05231 212 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 KLK2P20151 261 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 AGAP20933 346 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 TACR1P25103 407 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 AP2B1P63010 937 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 RAE1P78406 368 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 ABATP80404 500 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 MEF2AQ02078 507 aaPredicted RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 SLC9A5Q14940 896 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 FAAH2Q6GMR7 532 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 GALNT18Q6P9A2 607 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 SPESP1Q6UW49 350 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 MEX3BQ6ZN04 569 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 KRTCAP2Q8N6L1 136 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 ZNF740Q8NDX6 193 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 SLC13A3Q8WWT9 602 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 RSRC1Q96IZ7 334 aaKnown RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 SPHK1Q9NYA1 384 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms