RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CSO75390 466 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 GPC1P35052 558 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 MAPK12P53778 367 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 CD83Q01151 205 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 RBBP4Q09028 425 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SLAMF1Q13291 335 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF544Q6NX49 715 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 BRAT1Q6PJG6 821 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 KRT73Q86Y46 540 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 RSPRY1Q96DX4 576 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 CPEB1Q9BZB8 566 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 PLSCR3Q9NRY6 295 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 TBC1D24Q9ULP9 559 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SCN8AQ9UQD0 1980 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 ZAR1LA6NP61 321 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 ARAFP10398 606 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 PTX3P26022 381 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 DGKGP49619 791 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 FCHO2Q0JRZ9 810 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 PYDC2Q56P42 97 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TMEM215Q68D42 235 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 MMAAQ8IVH4 418 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 OR5D16Q8NGK9 328 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 SLC5A11Q8WWX8 675 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 FGF13Q92913 245 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 PAQR5Q9NXK6 330 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TAAR2Q9P1P5 351 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 ATP6V1HQ9UI12 483 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 FABP12A6NFH5 140 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 OTOL1A6NHN0 477 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 NPIPB8E9PQR5 432 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 NPC1O15118 1278 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF24P17028 368 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 HTR3AP46098 478 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TAP2Q03519 686 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 ATAT1Q5SQI0 421 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 CPA6Q8N4T0 437 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TRAM1L1Q8N609 369 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TMEM80Q96HE8 168 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 OR2A14Q96R47 310 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 CCDC177Q9NQR7 707 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 COMMD3Q9UBI1 195 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 FTSJ1Q9UET6 329 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 NUFIP1Q9UHK0 495 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
SFSWAP-201ENST00000261674 SLC5A10A0PJK1 596 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 ANHXE9PGG2 379 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 H1F0P07305 194 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF30P17039 623 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF91Q05481 1191 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MPP7Q5T2T1 576 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 HENMT1Q5T8I9 393 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 UCN3Q969E3 161 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 EFCAB11Q9BUY7 163 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 CDCA4Q9BXL8 241 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MVB12BQ9H7P6 319 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 A0A1W2PQL4 384 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 LZTS3O60299 673 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 CH25HO95992 272 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 CTSLP07711 333 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 HBQ1P09105 142 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 NR2F1P10589 423 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 IL7P13232 177 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 WASP42768 502 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 GPR1P46091 355 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SNAPC1Q16533 368 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SYPL1Q16563 259 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 CLEC12AQ5QGZ9 265 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 FAM71E1Q6IPT2 247 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 TCTN3Q6NUS6 607 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 TMCO6Q96DC7 493 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SMAD5Q99717 465 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 TMEM246Q9BRR3 403 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 NXF2Q9GZY0 626 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SLAMF7Q9NQ25 335 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 THSD1Q9NS62 852 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SPATA7Q9P0W8 599 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 MAPRE3Q9UPY8 281 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 PPIL1Q9Y3C6 166 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 A3GALT2U3KPV4 340 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 LTBP2Q14767 1821 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 SYNDIG1LA6NDD5 238 aa13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 POP7O75817 140 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-201ENST00000261674 OLFM2O95897 454 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms