RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NAT16Q8N8M0 369 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR10Z1Q8NGY1 313 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TMEM163Q8TC26 289 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ELP5Q8TE02 316 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SLC39A7Q92504 469 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 RAB39BQ96DA2 213 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 RAB3CQ96E17 227 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 YIPF6Q96EC8 236 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CPNE2Q96FN4 548 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 FRG2BQ96QU4 278 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 NIFKQ9BYG3 293 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SLC19A3Q9BZV2 496 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR51I1Q9H343 314 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MAP10Q9P2G4 905 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PCDHB7Q9Y5E2 793 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 COL1A2P08123 1366 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 COL11A2P13942 1736 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 VIPP01282 170 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 DDX6P26196 483 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SPAM1P38567 509 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PSPHP78330 225 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CHIT1Q13231 466 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MADCAM1Q13477 382 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 AWAT2Q6E213 333 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 FAM171BQ6P995 826 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ENPP6Q6UWR7 440 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PET117Q6UWS5 81 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ZNF574Q6ZN55 896 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ZNF627Q7L945 461 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 DTWD1Q8N5C7 304 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PCSK9Q8NBP7 692 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 IL17RDQ8NFM7 739 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR4K2Q8NGD2 314 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR10R2Q8NGX6 335 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MAPK15Q8TD08 544 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TFAP2BQ92481 460 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR14A2Q96R54 314 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ZNF649Q9BS31 505 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CRB3Q9BUF7 120 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 IMP3Q9NV31 184 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MRTO4Q9UKD2 239 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SLC27A6Q9Y2P4 619 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 B4GALT5O43286 388 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 VNN1O95497 513 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 AKAIN1P0CW23 69 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CD1DP15813 335 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 VAMP1P23763 118 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 EPHX2P34913 555 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 HSD17B2P37059 387 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ARL6IP1Q15041 203 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ZMYND11Q15326 602 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PLK5Q496M5 336 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 UBAP2Q5T6F2 1119 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 LARP4Q71RC2 724 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TRMT11Q7Z4G4 463 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TMED4Q7Z7H5 227 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 RASGRP3Q8IV61 690 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SLC35F3Q8IY50 421 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ADGRF3Q8IZF5 1079 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ACBD7Q8N6N7 88 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 GGHQ92820 318 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CLIP3Q96DZ5 547 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 BTN2A3PQ96KV6 586 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 FDXACB1Q9BRP7 624 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MED18Q9BUE0 208 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MYEF2Q9P2K5 600 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 COPS3Q9UNS2 423 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 AIPO00170 330 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 XKRYO14609 159 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 CACNG3O60359 315 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ZNF821O75541 412 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SORBS2O94875 1100 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 UQCRC2P22695 453 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 IGFALSP35858 605 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ARL2P36404 184 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 GLP1RP43220 463 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SNRPD1P62314 119 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 TUSC3Q13454 348 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 GANABQ14697 944 aaKnown RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 GNMTQ14749 295 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SCGB2B2Q4G0G5 96 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR4F3Q6IEY1 312 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 GPAT4Q86UL3 456 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 STPG2Q8N412 459 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ARL6IP6Q8N6S5 226 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SLAIN1Q8ND83 568 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 OR6F1Q8NGZ6 308 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 MZB1Q8WU39 189 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 BCL7CQ8WUZ0 217 aaPredicted RBP7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 NT5C3BQ969T7 300 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 ACSS2Q9NR19 701 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 DUSP22Q9NRW4 184 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
SNCAIP-201ENST00000261367 PCDHA9Q9Y5H5 950 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms