RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMPRSS11DO60235 418 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 KLHL41O60662 606 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 GBAP04062 536 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 KLK1P06870 262 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 GALNT1Q10472 559 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 CCNIQ14094 377 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 ARL13AQ5H913 290 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 EPGNQ6UW88 154 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 SCIMPQ6UWF3 145 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 COMMD6Q7Z4G1 85 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 CUZD1Q86UP6 607 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 DEFB107AQ8IZN7 70 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 FBXW8Q8N3Y1 598 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 THOC3Q96J01 351 aaKnown RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 ACPTQ9BZG2 426 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 LHPPQ9H008 270 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 EML4Q9HC35 981 aaKnown RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 MED13Q9UHV7 2174 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 K7EM74 188 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 CHRNGP07510 517 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 COX4I1P13073 169 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 TPP2P29144 1249 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 TLX1P31314 330 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 ARRB2P32121 409 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 SERPINB5P36952 375 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 CCNYL2Q5T2Q4 361 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 IRAK1BP1Q5VVH5 260 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 ZNF552Q9H707 407 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-201ENST00000260130 POMPQ9Y244 141 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 PCDHGB7Q9Y5F8 929 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 CLDN16Q9Y5I7 305 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 ARHGAP10A1A4S6 786 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 AZIN1O14977 448 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 SERPINA7P05543 415 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PRR35P0CG20 571 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 BUD31P41223 144 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PGDP52209 483 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 HMGCS1Q01581 520 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 VWA5B1Q5TIE3 1220 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 C18orf63Q68DL7 685 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PLAG1Q6DJT9 500 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 CLEC6AQ6EIG7 209 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 ATG14Q6ZNE5 492 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 CHTF18Q8WVB6 975 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 SMAD5Q99717 465 aaKnown RBP15.69■□□□□ 0.1
SDCBP-201ENST00000260130 RPF2Q9H7B2 306 aaKnown RBP15.69■□□□□ 0.1
SDCBP-201ENST00000260130 NUP210LQ5VU65 1888 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 TGFBR3LH3BV60 316 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PDE5AO76074 875 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PDGFAP04085 211 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 PRB1P04280 392 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 FGF4P08620 206 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 HK2P52789 917 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 TNFRSF17Q02223 184 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 STX4Q12846 297 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 MED21Q13503 144 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 FOXB2Q5VYV0 432 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 ASB18Q6ZVZ8 466 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 TRIM46Q7Z4K8 759 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 HOMEZQ8IX15 550 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 ST13P4Q8IZP2 240 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-201ENST00000260130 C1orf52Q8N6N3 182 aaKnown RBP15.69■□□□□ 0.1
SDCBP-201ENST00000260130 AMER2Q8N7J2 671 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 ZNF451Q9Y4E5 1061 aa15.69■□□□□ 0.1
SDCBP-201ENST00000260130 LOC100653049A0A140TA62 436 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 A0A1W2PR48 441 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 SYNDIG1LA6NDD5 238 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 LDB3O75112 727 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 KRT34O76011 436 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ALPPP05187 535 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 CELA2AP08217 269 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ZCCHC18P0CG32 403 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 UQCRBP14927 111 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 KLF10Q13118 480 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 EXT1Q16394 746 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 BTBD16Q32M84 506 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 C11orf91Q3C1V1 193 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ZNF781Q8N8C0 355 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 TANKQ92844 425 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 CCDC124Q96CT7 223 aaKnown RBP15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ALOXE3Q9BYJ1 711 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 TRIM4Q9C037 500 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 WDR41Q9HAD4 459 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 MAPK12P53778 367 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 NFATC3Q12968 1075 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 IMPG1Q17R60 797 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 AGAP7PQ5VUJ5 663 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 JMJD6Q6NYC1 403 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-201ENST00000260130 CLYBLQ8N0X4 340 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 C7orf57Q8NEG2 295 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 M1APQ8TC57 530 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ANKRD9Q96BM1 317 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-201ENST00000260130 APIPQ96GX9 242 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 AGAP4Q96P64 663 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 ILKAPQ9H0C8 392 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-201ENST00000260130 PNO1Q9NRX1 252 aaKnown RBP15.68■□□□□ 0.1
SDCBP-201ENST00000260130 C5AR2Q9P296 337 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 FIS1Q9Y3D6 152 aa15.68■□□□□ 0.1
SDCBP-201ENST00000260130 TRAF6Q9Y4K3 522 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms