RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NDNFQ8TB73 568 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 DNASE1L2Q92874 299 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 LRIG1Q96JA1 1093 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 RIPOR3Q96MK2 946 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ALPK1Q96QP1 1244 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 FAM120CQ9NX05 1096 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF624Q9P2J8 865 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 MALT1Q9UDY8 824 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 APOBEC3BQ9UH17 382 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PPIL1Q9Y3C6 166 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 C17orf51A8MQB3 221 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 P2RX6O15547 441 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TLX2O43763 284 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OR10H2O60403 315 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 BCL10O95999 233 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 RPN2P04844 631 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 KIR2DL1P43626 348 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CLK3P49761 638 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 HNRNPFP52597 415 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CRYBA2P53672 197 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CHRNEQ04844 493 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PRDX1Q06830 199 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 FOXM1Q08050 763 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ANXA8L1Q5VT79 327 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OR4C11Q6IEV9 310 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 HSDL2Q6YN16 418 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ADCK1Q86TW2 530 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OR2L3Q8NG85 312 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 B4GALNT2Q8NHY0 566 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ADAMTS15Q8TE58 950 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ATOH1Q92858 354 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SH3YL1Q96HL8 342 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 GAL3ST4Q96RP7 486 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PCNX1Q96RV3 2341 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OSBPL10Q9BXB5 764 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 NPLQ9BXD5 320 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 MVB12BQ9H7P6 319 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SCN3BQ9NY72 215 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 NDUFAF4Q9P032 175 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ANKMY1Q9P2S6 941 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 MGAQ8IWI9 3026 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 CENPVL1A0A0U1RR11 272 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 ZC3H12DA2A288 527 aaKnown RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 PRAMEF25A6NGN4 478 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 VEGFDO43915 354 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 NADKO95544 446 aaPredicted RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 GASTP01350 101 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 FESP07332 822 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 JUNDP17535 347 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 KRT20P35900 424 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 SLC9A3P48764 834 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 CSTF1Q05048 431 aaKnown RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 ATG9BQ674R7 924 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 OR5M10Q6IEU7 315 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 KIAA1161Q6NSJ0 714 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 IGFN1Q86VF2 1251 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 PTRH1Q86Y79 214 aaKnown RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 GALNT12Q8IXK2 581 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 GALNT15Q8N3T1 639 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 SLC44A3Q8N4M1 653 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 C10orf53Q8N6V4 93 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 SLC37A2Q8TED4 501 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 CNRIP1Q96F85 164 aaPredicted RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF514Q96K75 400 aaPredicted RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 BMFQ96LC9 184 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 KCNS3Q9BQ31 491 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 TREX2Q9BQ50 279 aaPredicted RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 COPS4Q9BT78 406 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 FUNDC2Q9BWH2 189 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 LMAN1LQ9HAT1 526 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 LRRK1Q38SD2 2015 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 NBEAQ8NFP9 2946 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 C2orf16Q68DN1 1984 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 A0A1W2PPK0 400 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 PSMD9O00233 223 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 AHCYL1O43865 530 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 TBX6O95947 436 aaPredicted RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 OPN1LWP04000 364 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 GYPBP06028 91 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 UMPSP11172 480 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 HOXA9P31269 272 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 CNR2P34972 360 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 LTBRP36941 435 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 TAS2R41P59536 307 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 DCDC1P59894 354 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 NPRL3Q12980 569 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 SPCS2Q15005 226 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 HYAL4Q2M3T9 481 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 INTS11Q5TA45 600 aaKnown RBP8.6□□□□□ -1.03
CKAP2-201ENST00000258607 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 PAGE2Q7Z2X7 111 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 COMTD1Q86VU5 262 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 TMEM151BQ8IW70 566 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 ATP6V1C2Q8NEY4 427 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 TSTD1Q8NFU3 115 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 UBTD2Q8WUN7 234 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 NRBF2Q96F24 287 aa8.6□□□□□ -1.03
CKAP2-201ENST00000258607 FOXN4Q96NZ1 517 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms