RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GRASPQ7Z6J2 395 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SIX5Q8N196 739 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 OR10H4Q8NGA5 316 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 OR52E4Q8NGH9 312 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ADAMTS15Q8TE58 950 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 JPH3Q8WXH2 748 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 ECHDC3Q96DC8 303 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 C11orf24Q96F05 449 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 ALG14Q96F25 216 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SPATA9Q9BWV2 254 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ABCG4Q9H172 646 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 OR51I1Q9H343 314 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ACER3Q9NUN7 267 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 NLKQ9UBE8 527 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ADAM30Q9UKF2 790 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 YARS2Q9Y2Z4 477 aaKnown RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 PCDHGB1Q9Y5G3 927 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PLXNA1Q9UIW2 1896 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 CD8B2A6NJW9 211 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 WASHC1A8K0Z3 465 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 WASH3PC4AMC7 463 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 K7ESM1 405 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PLD2O14939 933 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 KMOO15229 486 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PRKRAO75569 313 aaKnown RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 KCNK2O95069 426 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ADAP00813 363 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SAGP10523 405 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 CD8BP10966 210 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 BMP7P18075 431 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 IL1RNP18510 177 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 CPN2P22792 545 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PTPN6P29350 595 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TGFBR2P37173 567 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 CCR8P51685 355 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SMSP52788 366 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TAP2Q03519 686 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SGCGQ13326 291 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ZXDCQ2QGD7 858 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 LRIT3Q3SXY7 679 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ZNF311Q5JNZ3 666 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ARTNQ5T4W7 220 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 WASH2PQ6VEQ5 465 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 FAM92BQ6ZTR7 304 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 HTR3DQ70Z44 454 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TMEM145Q8NBT3 493 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ATP6V1C2Q8NEY4 427 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ZNF671Q8TAW3 534 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ZCCHC10Q8TBK6 192 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 WDR20Q8TBZ3 569 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 CHTF18Q8WVB6 975 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 RASSF5Q8WWW0 418 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TRIM63Q969Q1 353 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 COQ8BQ96D53 544 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 OMA1Q96E52 524 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 TRMT2BQ96GJ1 504 aaKnown RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 PPP1R16AQ96I34 528 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 ZFP3Q96NJ6 502 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 COQ7Q99807 217 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SPRTNQ9H040 489 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 GABARAPL1Q9H0R8 117 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 NEUROD4Q9HD90 331 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 SPATA6Q9NWH7 488 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 CUEDC1Q9NWM3 386 aaPredicted RBP4.51□□□□□ -1.69
USP44-201ENST00000258499 ING3Q9NXR8 418 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 KLHL42Q9P2K6 505 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 STUB1Q9UNE7 303 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 HS3ST2Q9Y278 367 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 HSPB11Q9Y547 144 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PCDHGA2Q9Y5H1 932 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 IRAK3Q9Y616 596 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PAPPA2Q9BXP8 1791 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 PIKFYVEQ9Y2I7 2098 aa4.51□□□□□ -1.69
USP44-201ENST00000258499 KCNE1BA0A087WTH5 132 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 C2orf92A0A1B0GVN3 265 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 MEIOCA2RUB1 952 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 SH3D21A4FU49 640 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 FAAHO00519 579 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 GNB5O14775 395 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 NDUFS4O43181 175 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 MRPS14O60783 128 aaKnown RBP4.5□□□□□ -1.69
USP44-201ENST00000258499 ABLIM3O94929 683 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 SLCO2B1O94956 709 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 YES1P07947 543 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 RHOP08100 348 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 SRPRAP08240 638 aaKnown RBP4.5□□□□□ -1.69
USP44-201ENST00000258499 ARAFP10398 606 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 IL7P13232 177 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 C6P13671 934 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 PRG2P13727 222 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 NPPBP16860 134 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 GPR4P46093 362 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 GZMMP51124 257 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 HNRNPFP52597 415 aaKnown RBP4.5□□□□□ -1.69
USP44-201ENST00000258499 RACK1P63244 317 aaKnown RBP4.5□□□□□ -1.69
USP44-201ENST00000258499 PRKCDQ05655 676 aa4.5□□□□□ -1.69
USP44-201ENST00000258499 TGM3Q08188 693 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms