RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SRPRAP08240 638 aaKnown RBP11.75□□□□□ -0.53
USP30-201ENST00000257548 HNF1BP35680 557 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 DGKGP49619 791 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 SUOXP51687 545 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 GRIN2CQ14957 1233 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 ATXN7L3Q14CW9 347 aaPredicted RBP11.75□□□□□ -0.53
USP30-201ENST00000257548 ZNF79Q15937 498 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 SLC30A6Q6NXT4 461 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 AGTRAPQ6RW13 159 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 CREB3L2Q70SY1 520 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 PRRT2Q7Z6L0 340 aaPredicted RBP11.75□□□□□ -0.53
USP30-201ENST00000257548 PTOV1Q86YD1 416 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 HUS1BQ8NHY5 278 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 PEX13Q92968 403 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 SLC39A13Q96H72 371 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 P2RY13Q9BPV8 354 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 THAP7Q9BT49 309 aaPredicted RBP11.75□□□□□ -0.53
USP30-201ENST00000257548 OR10A4Q9H209 315 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 USP34Q70CQ2 3546 aa11.75□□□□□ -0.53
USP30-201ENST00000257548 PTX3P26022 381 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 CCR6P51684 374 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 KIAA1024LP59773 190 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 TAGLNQ01995 201 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 MED27Q6P2C8 311 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 CXXC5Q7LFL8 322 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 LSRQ86X29 649 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 CFAP206Q8IYR0 622 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 NXPE1Q8N323 547 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 TRMT61BQ9BVS5 477 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 NUP50Q9UKX7 468 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 NAALAD2Q9Y3Q0 740 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 CKAP5Q14008 2032 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 LGALS8O00214 317 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 BPIP17213 487 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 HMGCLP35914 325 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 MTNR1AP48039 350 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 CSNK1DP48730 415 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 KCNJ10P78508 379 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP30-201ENST00000257548 CDONQ4KMG0 1287 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 RTP3Q9BQQ7 232 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 OSGEPL1Q9H4B0 414 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 RANBP3Q9H6Z4 567 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 METTL17Q9H7H0 456 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 MCCC2Q9HCC0 563 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 ZCCHC3Q9NUD5 404 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 CCDC88CQ9P219 2028 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 XIRP2A4UGR9 3374 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 J3QLW9 94 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 ARPC5O15511 151 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 ZNF19P17023 458 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 MAGEA11P43364 429 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 ZNF697Q5TEC3 545 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 KRT78Q8N1N4 520 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 ZNF655Q8N720 491 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 OR4K5Q8NGD3 323 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 NPLOC4Q8TAT6 608 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 ZBED6CLQ96FA7 236 aaPredicted RBP11.74□□□□□ -0.53
USP30-201ENST00000257548 ARL6Q9H0F7 186 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 CSNK1G3Q9Y6M4 447 aa11.74□□□□□ -0.53
USP30-201ENST00000257548 A0A075B6Q4 140 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 SMAD6O43541 496 aaKnown RBP11.73□□□□□ -0.53
USP30-201ENST00000257548 STX11O75558 287 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 MT-ND4P03905 459 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 IL32P24001 234 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 CSRP3P50461 194 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 WNT4P56705 351 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 PUDPQ08623 228 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 HYAL2Q12891 473 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 VEZF1Q14119 521 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 REEP3Q6NUK4 255 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 C17orf107Q6ZR85 190 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 DOK4Q8TEW6 326 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 OR4K3Q96R72 315 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 OR51J1Q9H342 316 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 FOLH1BQ9HBA9 442 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 CSNK1G1Q9HCP0 422 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 DAPL1A0PJW8 107 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 FAM25EA8MYX2 175 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 FMO6PO60774 539 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
USP30-201ENST00000257548 OSMP13725 252 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 HOXD9P28356 352 aaPredicted RBP11.73□□□□□ -0.53
USP30-201ENST00000257548 CCR7P32248 378 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 ERVFC1P60507 584 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 LRRC37A5PQ49AS3 106 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 ELP2Q6IA86 826 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 UNC5DQ6UXZ4 953 aa11.73□□□□□ -0.53
USP30-201ENST00000257548 MACC1Q6ZN28 852 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms