RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SLC35A5Q9BS91 424 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ASPNQ9BXN1 380 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 HDAC8Q9BY41 377 aa16.13■□□□□ 0.17
FOXA1-201ENST00000250448 EXOSC4Q9NPD3 245 aaKnown RBP16.13■□□□□ 0.17
FOXA1-201ENST00000250448 ZAR1LA6NP61 321 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 MPZL2O60487 215 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 NTSR1P30989 418 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 RBBP4Q09028 425 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 LRRC74AQ0VAA2 488 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 AQP11Q8NBQ7 271 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GAS2L1Q99501 681 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 CNPPD1Q9BV87 410 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 TAS2R9Q9NYW1 312 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 RGS5O15539 181 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 UGT2B17O75795 530 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 HOXB2P14652 356 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 TNFRSF4P43489 277 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 HBA1P69905 142 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ZFP69Q49AA0 526 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 TMEM52BQ4KMG9 183 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 SPIN4Q56A73 249 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 TRAPPC5Q8IUR0 188 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 RASGRP3Q8IV61 690 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 OR4K1Q8NGD4 311 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 MED8Q96G25 268 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 VPS35Q96QK1 796 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 BHLHE41Q9C0J9 482 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 HHATLQ9HCP6 504 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 EXO1Q9UQ84 846 aaKnown RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PCDHGB2Q9Y5G2 931 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 MBTPS2O43462 519 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 CYP7B1O75881 506 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GADD45GO95257 159 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PAK4O96013 591 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GSTM1P09488 218 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PIPP12273 146 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PDHA2P29803 388 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 MAT2AP31153 395 aaKnown RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 CNR2P34972 360 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ALDH9A1P49189 494 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PRIM2P49643 509 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 MRPS15P82914 257 aaKnown RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 NAE1Q13564 534 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GANABQ14697 944 aaKnown RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ARMC4Q5T2S8 1044 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 KLHL17Q6TDP4 642 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PRR23CQ6ZRP0 262 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 VASH1Q7L8A9 365 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 NRSN1Q8IZ57 195 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GOT1L1Q8NHS2 421 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 GPR151Q8TDV0 419 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ASB15Q8WXK1 588 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ST6GAL2Q96JF0 529 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 LGR4Q9BXB1 951 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 UBE2ZQ9H832 354 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 NFKBIL1Q9UBC1 381 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 ACSL6Q9UKU0 697 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 V9GYH0 126 aa16.12■□□□□ 0.17
FOXA1-201ENST00000250448 PRAMEF33A0A0G2JMD5 474 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 A0A1W2PQF6 199 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 KPNA5O15131 536 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 PRAMEF10O60809 474 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 C6orf47O95873 294 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 CHMP24386 653 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 DDOSTP39656 456 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 RFX2P48378 723 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 CRISP1P54107 249 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 LSM14AQ8ND56 463 aaKnown RBP16.11■□□□□ 0.17
FOXA1-201ENST00000250448 CXorf40BQ96DE9 158 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 BARHL1Q9BZE3 327 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 MBNL1Q9NR56 388 aaKnown RBP16.11■□□□□ 0.17
FOXA1-201ENST00000250448 SH3BP5O60239 455 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 SEMA3DO95025 777 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 SCG5P05408 212 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 CXCR2P25025 360 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 RPS19P39019 145 aaKnown RBP16.11■□□□□ 0.17
FOXA1-201ENST00000250448 CDK6Q00534 326 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 AGTRAPQ6RW13 159 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 ASCC1Q8N9N2 400 aaKnown RBP16.11■□□□□ 0.17
FOXA1-201ENST00000250448 OR14C36Q8NHC7 312 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 OR4K3Q96R72 315 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 TMEM38AQ9H6F2 299 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 STOX2Q9P2F5 926 aaPredicted RBP16.11■□□□□ 0.17
FOXA1-201ENST00000250448 GULP1Q9UBP9 304 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 ENPP4Q9Y6X5 453 aa16.11■□□□□ 0.17
FOXA1-201ENST00000250448 A8MV72 311 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 H3BM21 787 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF8P17098 575 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 HMGA2P52926 109 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 RHAGQ02094 409 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 EEF1A2Q05639 463 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 SYTL3Q4VX76 610 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF776Q68DI1 518 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 TMPRSS11AQ6ZMR5 421 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 OXR1Q8N573 874 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms