RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ASB16Q96NS5 453 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 OPALINQ96PE5 141 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 SERHL2Q9H4I8 314 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 FZD3Q9NPG1 666 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 ZDHHC4Q9NPG8 344 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-202ENST00000244303 MGAT4BQ9UQ53 548 aa13.64□□□□□ -0.23
HIF3A-202ENST00000244303 HEPACAM2A8MVW5 462 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 TMPRSS11DO60235 418 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 GPX5O75715 221 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 PDE9AO76083 593 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 KCNK2O95069 426 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 H1F0P07305 194 aaKnown RBP13.63□□□□□ -0.23
HIF3A-202ENST00000244303 SPNP16150 400 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 CXCR2P25025 360 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 RCVRNP35243 200 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 FRKP42685 505 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-202ENST00000244303 KCNJ5P48544 419 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 CCR8P51685 355 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 RPA4Q13156 261 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 ZNF234Q14588 700 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 ATAD3BQ5T9A4 648 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 SLX4IPQ5VYV7 408 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.63□□□□□ -0.23
HIF3A-202ENST00000244303 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 COX14Q96I36 57 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 WASH6PQ9NQA3 447 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 SEC14L3Q9UDX4 400 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 CFL2Q9Y281 166 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
HIF3A-202ENST00000244303 A0A0G2JN53 185 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 PRAMEF27A3QJZ7 478 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 FAAHO00519 579 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 HAT1O14929 419 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 ASNA1O43681 348 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SLC28A2O43868 658 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 PCCBP05166 539 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CA3P07451 260 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CKMT1AP12532 417 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 XKP51811 444 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SNRPGP62308 76 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 REEP5Q00765 189 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SYPL1Q16563 259 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 PGBD2Q6P3X8 592 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SZRD1Q7Z422 152 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 NUDT13Q86X67 352 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 AMER3Q8N944 861 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 ZBED6CLQ96FA7 236 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 DHRS1Q96LJ7 313 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 KCNS3Q9BQ31 491 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 MENTQ9BUN1 341 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 LGR4Q9BXB1 951 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 NDOR1Q9UHB4 597 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CLEC2DQ9UHP7 191 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 WBP11Q9Y2W2 641 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 PCDHGB6Q9Y5F9 930 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 A0A1W2PPV9 198 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 ANTXRLA6NF34 631 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 NDUFS4O43181 175 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CSO75390 466 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 PTTG1O95997 202 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SCG5P05408 212 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 OR12D1P0DN82 309 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SOX3P41225 446 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 P2RY2P41231 377 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SF3B4Q15427 424 aaKnown RBP eCLIP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 C12orf73Q69YU5 71 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 FAM109BQ6ICB4 259 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 LRRTM4Q86VH4 590 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 OR5D16Q8NGK9 328 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SLC7A13Q8TCU3 470 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CAPSLQ8WWF8 208 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 FGF13Q92913 245 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 TRNT1Q96Q11 434 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 ZNF607Q96SK3 696 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 TREX2Q9BQ50 279 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 NUAK2Q9H093 628 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 POLR2J3Q9H1A7 115 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 MTIF3Q9H2K0 278 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
HIF3A-202ENST00000244303 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 GOLGA4Q13439 2230 aaKnown RBP13.62□□□□□ -0.23
HIF3A-202ENST00000244303 CTDSP2O14595 271 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 OR1F1O43749 312 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CSTF2P33240 577 aaKnown RBP eCLIP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 RHAGQ02094 409 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TARDBPQ13148 414 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms