RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CD22P20273 847 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 DNASE1P24855 282 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 BLVRAP53004 296 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CRISP1P54107 249 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 SIGLEC14Q08ET2 396 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 ALG1LQ6GMV1 187 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CNIH2Q6PI25 160 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TPGS1Q6ZTW0 290 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 FAM9CQ8IZT9 166 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 NXPE1Q8N323 547 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 C2orf73Q8N5S3 287 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF655Q8N720 491 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 KLHL6Q8WZ60 621 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 AP2M1Q96CW1 435 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 FUBP3Q96I24 572 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TRBV4-1A0A0J9YWV2 114 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 M0R233 179 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC30A4O14863 429 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 CASKO14936 926 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SSNA1O43805 119 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 GMDSO60547 372 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 NCR1O76036 304 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SEMG1P04279 462 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 RAB8AP61006 207 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 PCDH1Q08174 1060 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF273Q14593 569 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 TRILQ7L0X0 811 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 MRPL10Q7Z7H8 261 aaKnown RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 APCDD1Q8J025 514 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 PTPN18Q99952 460 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SPRTNQ9H040 489 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 COPZ2Q9P299 210 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 MLXQ9UH92 298 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 TGFB1P01137 390 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 IFNA14P01570 189 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 HOXB9P17482 250 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 DOC2AQ14183 400 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 CCSMST1Q4G0I0 132 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 GHDCQ8N2G8 530 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 OR11H4Q8NGC9 324 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 OTULINQ96BN8 352 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 OTUB1Q96FW1 271 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 RANBP3Q9H6Z4 567 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC28A3Q9HAS3 691 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 LHX3Q9UBR4 397 aa13.47□□□□□ -0.25
PCDHB3-201ENST00000231130 H7C0S8 307 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GTPBP1O00178 669 aaKnown RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 DHFRP00374 187 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 HBQ1P09105 142 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 AVPR1BP47901 424 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 HSF2Q03933 536 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 VEZF1Q14119 521 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 POM121L1PQ3SYA9 428 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF385BQ569K4 471 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 RTL4Q6ZR62 310 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 OLIG3Q7RTU3 272 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 PDZD3Q86UT5 571 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 RAB8BQ92930 207 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 PARK7Q99497 189 aaKnown RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GSX2Q9BZM3 304 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 TMEM245Q9H330 911 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 ACER3Q9NUN7 267 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 SDHAF2Q9NX18 166 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 NPIPB15A6NHN6 443 aaPredicted RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC38A8A6NNN8 435 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF623O75123 536 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 OAZ2O95190 189 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 IGLV3-27P01718 113 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 RRASP10301 218 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GABRB1P18505 474 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 STOMP27105 288 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 SPAM1P38567 509 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 CDK6Q00534 326 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 HSD17B12Q53GQ0 312 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 KLHL22Q53GT1 634 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 CXorf57Q6NSI4 855 aaKnown RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 RBM45Q8IUH3 476 aaKnown RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 LIX1LQ8IVB5 337 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 LILRA3Q8N6C8 439 aaPredicted RBP13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 OR52H1Q8NGJ2 320 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GATAD2BQ8WXI9 593 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC6A15Q9H2J7 730 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms