RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 C3orf14Q9HBI5 128 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 SLC35C2Q9NQQ7 365 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 GPATCH2Q9NW75 528 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 SCHIP1Q9P0W5 487 aaPredicted RBP10.09□□□□□ -0.79
CDCA3-201ENST00000229265 NTMQ9P121 344 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 SUSD2Q9UGT4 822 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 ENOPH1Q9UHY7 261 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 PHF11Q9UIL8 331 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 ANGPT4Q9Y264 503 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 PLEKHM1Q9Y4G2 1056 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 ASB4Q9Y574 426 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 RP1P56715 2156 aa10.09□□□□□ -0.79
CDCA3-201ENST00000229265 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 FEZF1A0PJY2 475 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 BLACEA4D250 179 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 DUXAA6NLW8 204 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF701M0R085 212 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 PDLIM1O00151 329 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ZW10O43264 779 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 PROM1O43490 865 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ASNA1O43681 348 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 PCDHGA12O60330 932 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SERPINB7O75635 380 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TFAP2AP05549 437 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF883P0CG24 379 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ANXA8P13928 327 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CTSEP14091 401 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TLX1P31314 330 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 BCL6P41182 706 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SSR2P43308 183 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CCT3P49368 545 aaKnown RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 PCBP3P57721 371 aaKnown RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SMIM11AP58511 58 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 DSTNP60981 165 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 UBE2IP63279 158 aaKnown RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 KCNJ10P78508 379 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 MC1RQ01726 317 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 KCNC4Q03721 635 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 HYAL2Q12891 473 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 EIF2B5Q13144 721 aaKnown RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 BIKQ13323 160 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SCARB2Q14108 478 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 IQCCQ4KMZ1 466 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 AP1ARQ63HQ0 302 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TTC33Q6PID6 262 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 FIGLAQ6QHK4 219 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 C6orf120Q7Z4R8 191 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ADCK2Q7Z695 626 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 THAP5Q7Z6K1 395 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ASPGQ86U10 573 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TRIM48Q8IWZ4 208 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 C2orf73Q8N5S3 287 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ACOT4Q8N9L9 421 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SETD9Q8NE22 299 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TSPAN14Q8NG11 270 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CDC26Q8NHZ8 85 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TSACCQ96A04 125 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-201ENST00000229265 OR2A14Q96R47 310 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 OR2A5Q96R48 311 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF607Q96SK3 696 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TUBA1CQ9BQE3 449 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CHRNA10Q9GZZ6 450 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 TMEM168Q9H0V1 697 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 EVA1AQ9H8M9 152 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 LYRM4Q9HD34 91 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 BCL2L10Q9HD36 194 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 SLC6A20Q9NP91 592 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 FAM118AQ9NWS6 357 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CALML5Q9NZT1 146 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CPNE7Q9UBL6 633 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 CES1P1Q9UKY3 287 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 MSRB2Q9Y3D2 182 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 MGAQ8IWI9 3026 aa10.08□□□□□ -0.8
CDCA3-201ENST00000229265 ZFC3H1O60293 1989 aaKnown RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 M0QX08 132 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SAP18O00422 153 aaKnown RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SIGLEC6O43699 453 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SRPX2O60687 465 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 E2F6O75461 281 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 JRKO75564 520 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF682O95780 498 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 CER1O95813 267 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 TFPTP0C1Z6 253 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 LINGO3P0C6S8 592 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ITGAMP11215 1152 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ETS2P15036 469 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 RHCEP18577 417 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 CSNK2A2P19784 350 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 NTSP30990 170 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 BUD31P41223 144 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 MAPK10P53779 464 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ITGA1P56199 1179 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ESRRGP62508 458 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SKP1P63208 163 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SLC14A1Q13336 389 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 APOFQ13790 326 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms