RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 DPPA4Q7L190 304 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ABI3BPQ7Z7G0 1075 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 SDCCAG8Q86SQ7 713 aaPredicted RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 LRRC8AQ8IWT6 810 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 UMODL1-AS1Q8N2C9 162 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 CCDC185Q8N715 623 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 RBM15BQ8NDT2 890 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 TRIM58Q8NG06 486 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 BCAS4Q8TDM0 211 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ERGIC1Q969X5 290 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ISG20Q96AZ6 181 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 SARAFQ96BY9 339 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 EGLN2Q96KS0 407 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ZNF599Q96NL3 588 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 PPP1R2P1Q96PQ5 205 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 DUSP26Q9BV47 211 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 RTN4RQ9BZR6 473 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 DENND2DQ9H6A0 471 aaPredicted RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 CYSLTR2Q9NS75 346 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 CHCHD3Q9NX63 227 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 COPG2Q9UBF2 871 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 SPASTQ9UBP0 616 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 HS3ST2Q9Y278 367 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 LRRD1A4D1F6 860 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TMEM110-MUSTN1A8MSY1 372 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 LMO7DNF2Z398 122 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 H0YAE9 185 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 SMAD6O43541 496 aaKnown RBP6.51□□□□□ -1.37
CCL1-201ENST00000225842 KDELR3O43731 214 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 SNAP91O60641 907 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 RAD1O60671 282 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 RECQL5O94762 991 aaPredicted RBP6.51□□□□□ -1.37
CCL1-201ENST00000225842 IGSF6O95976 241 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 CYC1P08574 325 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 CCL4P13236 92 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TCN2P20062 427 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 CTNNA2P26232 953 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 NR2C2P49116 596 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 RAB28P51157 221 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 POLR2LP62875 67 aaKnown RBP6.51□□□□□ -1.37
CCL1-201ENST00000225842 FAM27E3Q08E93 113 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 CNTN1Q12860 1018 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 NFE2L1Q14494 772 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ZNF235Q14590 738 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 PNLIPRP3Q17RR3 467 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 HYAL4Q2M3T9 481 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ZNF284Q2VY69 593 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 NADK2Q4G0N4 442 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ZRANB3Q5FWF4 1079 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TFDP3Q5H9I0 405 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TPRG1LQ5T0D9 272 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ATP1A1-AS1Q5TC04 95 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TMEM211Q6ICI0 200 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 GCNT7Q6ZNI0 430 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ZNF627Q7L945 461 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 PEX26Q7Z412 305 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 CCDC50Q8IVM0 306 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 RCOR2Q8IZ40 523 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ATPAF2Q8N5M1 289 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TMCO5AQ8N6Q1 288 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 Q8N9G6 341 aaPredicted RBP6.51□□□□□ -1.37
CCL1-201ENST00000225842 MAIP1Q8WWC4 291 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 HDAC11Q96DB2 347 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 GDAP1L1Q96MZ0 367 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 AGAP2Q99490 1192 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 SLCO5A1Q9H2Y9 848 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 OLAHQ9NV23 265 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 RNF215Q9Y6U7 377 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 NYNRINQ9P2P1 1898 aaKnown RBP6.51□□□□□ -1.37
CCL1-201ENST00000225842 CHD5Q8TDI0 1954 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
CCL1-201ENST00000225842 ANKHD1Q8IWZ3 2542 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 A0A0D9SEW6 157 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 KIR2DS5A0A0G2JLQ3 304 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 MAGEB17A8MXT2 336 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 PRSS44E7EML9 344 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 NPIPB8E9PQR5 432 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 KIR2DS3K7RE56 304 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 MCF2LO15068 1137 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 BUB1O43683 1085 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 PALMO75781 387 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 ZMPSTE24O75844 475 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 POP4O95707 220 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 GSRP00390 522 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 ATP5F1P24539 256 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 SERPINH1P50454 418 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 CDH13P55290 713 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 RWDD2BP57060 319 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 TUBA4AP68366 448 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 PPP2R2BQ00005 443 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 OGDHQ02218 1023 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 SLC25A11Q02978 314 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 IL10RBQ08334 325 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 SLMAPQ14BN4 828 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 PDK1Q15118 436 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 SMTNL2Q2TAL5 461 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 PRR30Q53SZ7 412 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 PIP5KL1Q5T9C9 394 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 SEL1L2Q5TEA6 688 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms