RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CCRL2O00421 344 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 OR10H3O60404 316 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 DBTP11182 482 aaKnown RBP20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 C5AR1P21730 350 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 FUT4P22083 530 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 POU1F1P28069 291 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 CSTF2P33240 577 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 GRK5P34947 590 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 ABATP80404 500 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 SEC23BQ15437 767 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 CST6Q15828 149 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 PGBD2Q6P3X8 592 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 C12orf66Q96MD2 445 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 OR51E2Q9H255 320 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 OR51I1Q9H343 314 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 GLIPR2Q9H4G4 154 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 SERHL2Q9H4I8 314 aa20.81■□□□□ 0.92
SMARCD2-201ENST00000225742 A0A1W2PRQ8 180 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 DSCR3O14972 297 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 MID1O15344 667 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 LCMT2O60294 686 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 KAT7O95251 611 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 GPC1P35052 558 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 SOX6P35712 828 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 XKP51811 444 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 RUNX3Q13761 415 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 OCLNQ16625 522 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 PRAMEF8Q5VWM4 474 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 PRAMEF7Q5VXH5 474 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 CASP12Q6UXS9 341 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 DEF8Q6ZN54 512 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 NUDT18Q6ZVK8 323 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 TRIM69Q86WT6 500 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 OR8J1Q8NGP2 316 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 KLHL6Q8WZ60 621 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 CDADC1Q9BWV3 514 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 POLR2J3Q9H1A7 115 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 MVB12BQ9H7P6 319 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 SLC9A8Q9Y2E8 581 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 RPL36Q9Y3U8 105 aaKnown RBP20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 STON1Q9Y6Q2 735 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 CCDC88CQ9P219 2028 aa20.8■□□□□ 0.92
SMARCD2-201ENST00000225742 LOC100506127A0A0U1RQW1 187 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 M0R129 80 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 UGT2B17O75795 530 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 OR12D1P0DN82 309 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 NR2F1P10589 423 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 FCARP24071 287 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 GJA4P35212 333 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 CRISP3P54108 245 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 ENPP2Q13822 863 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 IRF4Q15306 451 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 TPRG1LQ5T0D9 272 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 NDUFAF5Q5TEU4 345 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 GDPGP1Q6ZNW5 385 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 SPRED2Q7Z698 418 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 ZNF513Q8N8E2 541 aaPredicted RBP20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 OR2A1Q8NGT9 310 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 WDR36Q8NI36 951 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 NR4A3Q92570 626 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 NRTNQ99748 197 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 ARMC7Q9H6L4 198 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 MBNL1Q9NR56 388 aaKnown RBP20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 C5AR2Q9P296 337 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 SLC6A14Q9UN76 642 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 CFL2Q9Y281 166 aa20.79■□□□□ 0.92
SMARCD2-201ENST00000225742 MAN2B1O00754 1011 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ENTPD6O75354 484 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 AHRP35869 848 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SLC9A5Q14940 896 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 MLF2Q15773 248 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SLC25A30Q5SVS4 291 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ADCK2Q7Z695 626 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 NLGN4XQ8N0W4 816 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TMEM80Q96HE8 168 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 BBS4Q96RK4 519 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 CHCHD6Q9BRQ6 235 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TAPBPLQ9BX59 468 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 RSPO3Q9BXY4 272 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 MTIF3Q9H2K0 278 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SIAEQ9HAT2 523 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 CPNE5Q9HCH3 593 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 C11orf16Q9NQ32 467 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 A4GNTQ9UNA3 340 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 WDR37Q9Y2I8 494 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TRPM6Q9BX84 2022 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SEMA7AO75326 666 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 HSMCR30P0CW71 290 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ACP5P13686 325 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ETV6P41212 452 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SFSWAPQ12872 951 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 GPM6BQ13491 265 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 MED22Q15528 200 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SYPL1Q16563 259 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TSTQ16762 297 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 KIAA1211LQ6NV74 962 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ADGRD2Q7Z7M1 963 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ATCAYQ86WG3 371 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TP53I13Q8NBR0 393 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms