RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ABCB7O75027 752 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 LRATO95237 230 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 MGAT2Q10469 447 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 BIKQ13323 160 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 HEPACAMQ14CZ8 416 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 ATP6AP1LQ52LC2 224 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CRB2Q5IJ48 1285 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 ANKRD26P1Q6NSI1 321 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 IGFL2Q6UWQ7 119 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 MAVSQ7Z434 540 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 TICAM1Q8IUC6 712 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CCDC116Q8IYX3 515 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 LIX1Q8N485 282 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 SIMC1Q8NDZ2 872 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR1N1Q8NGS0 311 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CKAP2Q8WWK9 683 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 DAZLQ92904 295 aaKnown RBP13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 RIT1Q92963 219 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 LMF1Q96S06 567 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CCT7Q99832 543 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 WDR55Q9H6Y2 383 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 CXorf21Q9HAI6 301 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 TMEM200CA6NKL6 621 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 SDHDO14521 159 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF195O14628 629 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 CLPSP04118 112 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 IGKV3-11P04433 115 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 DDCP20711 480 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 S1PR1P21453 382 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 NT5EP21589 574 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 CLCN2P51788 898 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 ERVK-8P63133 956 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 PLIN5Q00G26 463 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 MFAP5Q13361 173 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 LTB4RQ15722 352 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 ACER2Q5QJU3 275 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 IGFL3Q6UXB1 125 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 RPS19BP1Q86WX3 136 aaKnown RBP13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF843Q8N446 348 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 FNDC5Q8NAU1 212 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 DYDC1Q8WWB3 177 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 VMP1Q96GC9 406 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 DEFB126Q9BYW3 111 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 MEAF6Q9HAF1 191 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLC35C2Q9NQQ7 365 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 ERVK-19Q9WJR5 959 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 TMED5Q9Y3A6 229 aa13.4□□□□□ -0.26
SUPT4H1-201ENST00000225504 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 GABRR3A8MPY1 467 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 HDAC3O15379 428 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 WDPCPO95876 746 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ALPPP05187 535 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 COX7A2P14406 83 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 SSTR4P31391 388 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 GALNSP34059 522 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 EMX2Q04743 252 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 PTGR1Q14914 329 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 PLEKHN1Q494U1 663 aaPredicted RBP13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF385BQ569K4 471 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.274e-7■■■□□ 16.1
SUPT4H1-201ENST00000225504 BEST3Q8N1M1 668 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 FBXL20Q96IG2 436 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 CNPPD1Q9BV87 410 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 TAS2R7Q9NYW3 318 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 EHD3Q9NZN3 535 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 LUZP4Q9P127 313 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 PCDHGB7Q9Y5F8 929 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF780BQ9Y6R6 833 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 CFAP46Q8IYW2 2715 aa13.39□□□□□ -0.27
SUPT4H1-201ENST00000225504 CPAMD8Q8IZJ3 1885 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZFAND5O76080 213 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ATP1B1P05026 303 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 G6PDP11413 515 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 EPHA3P29320 983 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 GSTM5P46439 218 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 DIO3P55073 304 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 MLF1P58340 268 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 AP2B1P63010 937 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 RNF4P78317 190 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms