RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 OR9A2Q8NGT5 310 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 DNAJB9Q9UBS3 223 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 CLCA2Q9UQC9 943 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 CYR61O00622 381 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SUV39H1O43463 412 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SEMG1P04279 462 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SP9P0CG40 484 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 ANXA11P50995 505 aaKnown RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 XKP51811 444 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CRYBA2P53672 197 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 WDR74Q6RFH5 385 aaPredicted RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 USP53Q70EK8 1073 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 Q8N9G6 341 aaPredicted RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 OR9A4Q8NGU2 314 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 TBC1D20Q96BZ9 403 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 HSH2DQ96JZ2 352 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 ZNF597Q96LX8 424 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 NR1H4Q96RI1 486 aaPredicted RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 GAREM1Q9H706 876 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 C3orf14Q9HBI5 128 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 IL1RAPQ9NPH3 570 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 IRAK4Q9NWZ3 460 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 RAB26Q9ULW5 256 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 HMGN4O00479 90 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SOCS2O14508 198 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 EMC8O43402 210 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 RDH16O75452 317 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 GCM2O75603 506 aaPredicted RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 IFNA14P01570 189 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 ZNF23P17027 643 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 PCBP3P57721 371 aaKnown RBP17.07■□□□□ 0.32
VIM-201ENST00000224237 HSD11B2P80365 405 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CFHR1Q03591 330 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 NR0B2Q15466 257 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 ZNF528Q3MIS6 628 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CYBRD1Q53TN4 286 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CRB2Q5IJ48 1285 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 REEP3Q6NUK4 255 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CBR4Q8N4T8 237 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 OR10Q1Q8NGQ4 319 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 TANKQ92844 425 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CCDC74AQ96AQ1 378 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 ELP4Q96EB1 424 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SLC29A1Q99808 456 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 Q9H521 79 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 CAPN10Q9HC96 672 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 RP1P56715 2156 aa17.07■□□□□ 0.32
VIM-201ENST00000224237 HYKKA2RU49 373 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 FITM1A5D6W6 292 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 TMEM247A6NEH6 219 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 C5orf58C9J3I9 102 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 GNGT2O14610 69 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 NSA2O95478 260 aaKnown RBP17.06■□□□□ 0.32
VIM-201ENST00000224237 CPMP14384 443 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 MATN1P21941 496 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 CD1CP29017 333 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 AVPR2P30518 371 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 CSF2RBP32927 897 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 MC3RP41968 323 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 ARL4DP49703 201 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 KHKP50053 298 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 SELENOWP63302 87 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 TXNL4AP83876 142 aaKnown RBP17.06■□□□□ 0.32
VIM-201ENST00000224237 FOLH1Q04609 750 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 MYBPC3Q14896 1274 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 ANGPT1Q15389 498 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 GPR19Q15760 415 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 VTCN1Q7Z7D3 282 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 PATL1Q86TB9 770 aaKnown RBP17.06■□□□□ 0.32
VIM-201ENST00000224237 ZDHHC21Q8IVQ6 265 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 SHISA5Q8N114 240 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 TPD52L3Q96J77 140 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 MAGED4Q96JG8 741 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 DOHHQ9BU89 302 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 OR51I1Q9H343 314 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 SERHL2Q9H4I8 314 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 NTN4Q9HB63 628 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 P2RX2Q9UBL9 471 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 ZNF639Q9UID6 485 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 ZNF451Q9Y4E5 1061 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
VIM-201ENST00000224237 A0A0A6YYC8 382 aaPredicted RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 I3L1I5 382 aaPredicted RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 PDLIM1O00151 329 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 ACOX3O15254 700 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 RASAL1O95294 804 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 FABP3P05413 133 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 BCHEP06276 602 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 PORP16435 677 aaPredicted RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 PTGER1P34995 402 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 PRKAG1P54619 331 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 MED21Q13503 144 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 PRSS42Q7Z5A4 293 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 KMT5CQ86Y97 462 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 METTL25Q8N6Q8 603 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 FAM181AQ8N9Y4 354 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms