RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 GABARAPL3Q9BY60 117 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 TMEM168Q9H0V1 697 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 KIR3DX1Q9H7L2 352 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 A4GALTQ9NPC4 353 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PRDM7Q9NQW5 492 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 C5orf58C9J3I9 102 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 E9PQ18 207 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 BTN3A3O00478 584 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PCDH17O14917 1159 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PGRMC2O15173 223 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PCDHGA12O60330 932 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 DNAJB5O75953 348 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 INMTO95050 263 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 VIPP01282 170 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 CHRM5P08912 532 aaPredicted RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 TFPTP0C1Z6 253 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 CD247P20963 164 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 CERS1P27544 350 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 RXRGP48443 463 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 RAB8AP61006 207 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 SNRPNP63162 240 aaKnown RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 DUSP2Q05923 314 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 MDC1Q14676 2089 aaKnown RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 ABHD17CQ6PCB6 329 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 OLIG3Q7RTU3 272 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 AMIGO1Q86WK6 493 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 ARMC8Q8IUR7 673 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 RBM12BQ8IXT5 1001 aaKnown RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 LGI4Q8N135 537 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 CEP192Q8TEP8 1941 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 APH1BQ8WW43 257 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 LCN9Q8WX39 176 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 HSPA12BQ96MM6 686 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 SLC6A18Q96N87 628 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 AMDHD1Q96NU7 426 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PITX2Q99697 317 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 APOBEC3BQ9UH17 382 aaKnown RBP17.14■□□□□ 0.33
USP18-201ENST00000215794 FBXW2Q9UKT8 454 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 ATG4BQ9Y4P1 393 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
USP18-201ENST00000215794 SPEGQ15772 3267 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 A0A1W2PR48 441 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 PRAMEF27A3QJZ7 478 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 FOXD2O60548 495 aaPredicted RBP17.13■□□□□ 0.33
USP18-201ENST00000215794 ERAL1O75616 437 aaKnown RBP17.13■□□□□ 0.33
USP18-201ENST00000215794 IFNA14P01570 189 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
USP18-201ENST00000215794 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 MICAQ29983 383 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 TMEM35AQ53FP2 167 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 C18orf63Q68DL7 685 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 ZNF605Q86T29 641 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 TSPYL5Q86VY4 417 aaPredicted RBP17.13■□□□□ 0.33
USP18-201ENST00000215794 ENTHD1Q8IYW4 607 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 NATD1Q8N6N6 113 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 GPR32P1Q8NGA4 272 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 MUL1Q969V5 352 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 PIP5K1AQ99755 562 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 ORAI3Q9BRQ5 295 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 MIR1-1HGQ9H1L0 117 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 SLC35C2Q9NQQ7 365 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 ACSS1Q9NUB1 689 aaPredicted RBP17.13■□□□□ 0.33
USP18-201ENST00000215794 ACER3Q9NUN7 267 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 ASB4Q9Y574 426 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 PCDHGA4Q9Y5G9 962 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 COLEC10Q9Y6Z7 277 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 HSPE1-MOB4S4R3N1 261 aa17.13■□□□□ 0.33
USP18-201ENST00000215794 C10orf142B7Z368 130 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 WBP4O75554 376 aaKnown RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 OR12D1P0DN82 309 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 POU2F1P14859 743 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ATP5A1P25705 553 aaKnown RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 CMPK1P30085 196 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 GPC1P35052 558 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 KRT20P35900 424 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ACTR1BP42025 376 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 MAP2K4P45985 399 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 STT3AP46977 705 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 NCBP2P52298 156 aaKnown RBP eCLIP17.12■□□□□ 0.33
USP18-201ENST00000215794 GP2P55259 537 aaKnown RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 LIM2P55344 173 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ACTR1AP61163 376 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 TRA2BP62995 288 aaKnown RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 ABATP80404 500 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 EMX1Q04741 257 aaPredicted RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 SYPL1Q16563 259 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ZNF425Q6IV72 752 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ZNF764Q96H86 408 aaPredicted RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 CNDP2Q96KP4 475 aaKnown RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 WDR92Q96MX6 357 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 CSF3RQ99062 836 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 TIMMDC1Q9NPL8 285 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
USP18-201ENST00000215794 TAS2R7Q9NYW3 318 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 ENPP4Q9Y6X5 453 aa17.12■□□□□ 0.33
USP18-201ENST00000215794 FAM227AF5H4B4 570 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms