RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 TEX19Q8NA77 164 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 OR1J4Q8NGS1 313 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 OR4Q3Q8NH05 313 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 TRMT10AQ8TBZ6 339 aaKnown RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 MUL1Q969V5 352 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 KLHL9Q9P2J3 617 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 A0A1W2PPL8 197 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 KLRG2A4D1S0 409 aaPredicted RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 ZNF208O43345 1280 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 C6orf47O95873 294 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 WDPCPO95876 746 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 PRKCGP05129 697 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 ZDHHC11BP0C7U3 371 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 CFL1P23528 166 aaKnown RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 RPS10P46783 165 aaKnown RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 HCAR3P49019 387 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 KEAP1Q14145 624 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 PCBP2Q15366 365 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■□□□□ 11.2
VCL-201ENST00000211998 CDNFQ49AH0 187 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 TECRLQ5HYJ1 363 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SPIN3Q5JUX0 258 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 C1QTNF12Q5T7M4 302 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 GID4Q8IVV7 300 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 THEM6Q8WUY1 208 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 CDKN2AIPNLQ96HQ2 116 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SLC38A3Q99624 504 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 FAAHO00519 579 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 LSSP48449 732 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 POU4F2Q12837 409 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 DUSP6Q16828 381 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 ADGRG5Q8IZF4 528 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 ZNF565Q8N9K5 539 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SYT14Q8NB59 555 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 CMTM7Q96FZ5 175 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SLC39A13Q96H72 371 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 CRB3Q9BUF7 120 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 ERVMER34-1Q9H9K5 563 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 AP1M2Q9Y6Q5 423 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 TCRBV3S1A0A5B6 114 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 YJEFN3A6XGL0 299 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 FABP7O15540 132 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 POLR2CP19387 275 aaPredicted RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 LMO2P25791 158 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 IL12BP29460 328 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 PEA15Q15121 130 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SOWAHAQ2M3V2 549 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 UNC50Q53HI1 259 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 SIRPB2Q5JXA9 342 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 PRSS55Q6UWB4 352 aaPredicted RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 OR13F1Q8NGS4 319 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 DHRS9Q9BPW9 319 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 OSBPL2Q9H1P3 480 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 MED1Q15648 1581 aaPredicted RBP10.01□□□□□ -0.81
VCL-201ENST00000211998 TTC24A2A3L6 582 aaPredicted RBP10□□□□□ -0.81
VCL-201ENST00000211998 SMLR1H3BR10 107 aa10□□□□□ -0.81
VCL-201ENST00000211998 EIF1AYO14602 144 aaKnown RBP10□□□□□ -0.81
VCL-201ENST00000211998 KLK1P06870 262 aa10□□□□□ -0.81
VCL-201ENST00000211998 SMIM18P0DKX4 95 aa10□□□□□ -0.81
VCL-201ENST00000211998 BMP8BP34820 402 aa10□□□□□ -0.81
VCL-201ENST00000211998 EIF1AXP47813 144 aaKnown RBP10□□□□□ -0.81
VCL-201ENST00000211998 PGGT1BP53609 377 aa10□□□□□ -0.81
VCL-201ENST00000211998 SSTP61278 116 aa10□□□□□ -0.81
VCL-201ENST00000211998 HTRA4P83105 476 aaPredicted RBP10□□□□□ -0.81
VCL-201ENST00000211998 MINDY4Q4G0A6 757 aa10□□□□□ -0.81
VCL-201ENST00000211998 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
VCL-201ENST00000211998 REEP3Q6NUK4 255 aa10□□□□□ -0.81
VCL-201ENST00000211998 PGAP1Q75T13 922 aa10□□□□□ -0.81
VCL-201ENST00000211998 BMP8AQ7Z5Y6 402 aa10□□□□□ -0.81
VCL-201ENST00000211998 CILP2Q8IUL8 1156 aa10□□□□□ -0.81
VCL-201ENST00000211998 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
VCL-201ENST00000211998 PNLDC1Q8NA58 520 aaKnown RBP10□□□□□ -0.81
VCL-201ENST00000211998 CCDC54Q8NEL0 328 aa10□□□□□ -0.81
VCL-201ENST00000211998 DBF4BQ8NFT6 615 aa10□□□□□ -0.81
VCL-201ENST00000211998 TRIB2Q92519 343 aa10□□□□□ -0.81
VCL-201ENST00000211998 RPL3LQ92901 407 aaKnown RBP10□□□□□ -0.81
VCL-201ENST00000211998 SYT17Q9BSW7 474 aa10□□□□□ -0.81
VCL-201ENST00000211998 ACOT13Q9NPJ3 140 aa10□□□□□ -0.81
VCL-201ENST00000211998 OLAHQ9NV23 265 aa10□□□□□ -0.81
VCL-201ENST00000211998 B3GNT2Q9NY97 397 aa10□□□□□ -0.81
VCL-201ENST00000211998 ATRNL1Q5VV63 1379 aa10□□□□□ -0.81
VCL-201ENST00000211998 CIB4A0PJX0 185 aa10□□□□□ -0.81
VCL-201ENST00000211998 H7C417 338 aa10□□□□□ -0.81
VCL-201ENST00000211998 RFXAPO00287 272 aa10□□□□□ -0.81
VCL-201ENST00000211998 TLX3O43711 291 aaPredicted RBP10□□□□□ -0.81
VCL-201ENST00000211998 EBLN1P0CF75 366 aa10□□□□□ -0.81
VCL-201ENST00000211998 AKR1C4P17516 323 aa10□□□□□ -0.81
VCL-201ENST00000211998 PRKCZQ05513 592 aa10□□□□□ -0.81
VCL-201ENST00000211998 OPCMLQ14982 345 aa10□□□□□ -0.81
VCL-201ENST00000211998 PTCHD3Q3KNS1 767 aa10□□□□□ -0.81
VCL-201ENST00000211998 VASH1Q7L8A9 365 aaPredicted RBP10□□□□□ -0.81
VCL-201ENST00000211998 LYSMD3Q7Z3D4 306 aa10□□□□□ -0.81
VCL-201ENST00000211998 AMZ2Q86W34 360 aa10□□□□□ -0.81
VCL-201ENST00000211998 FAM129CQ86XR2 697 aa10□□□□□ -0.81
VCL-201ENST00000211998 LYSMD2Q8IV50 215 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms