RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 E9PQ18 207 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 H0Y8X5 98 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 TMX2-CTNND1H3BSU7 103 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 BTN3A3O00478 584 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 FAAHO00519 579 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 TNFRSF10CO14798 259 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 PCDH17O14917 1159 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 SLC22A1O15245 554 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 MAN1A2O60476 641 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 B4GALT2O60909 372 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 GABARAPO95166 117 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 VIPP01282 170 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 H1F0P07305 194 aaKnown RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 FHP07954 510 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 NR2F6P10588 404 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 POU2F1P14859 743 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 NDUFV2P19404 249 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 CBLP22681 906 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 MPIP34949 423 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 BUD31P41223 144 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 CTSKP43235 329 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 MAP2K4P45985 399 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 STT3AP46977 705 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 LIMS1P48059 325 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 KCNJ5P48544 419 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 UGT2B15P54855 530 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 HYAL2Q12891 473 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 FOXD4Q12950 439 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 BNIP3Q12983 259 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 DGCR6Q14129 220 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 KIR2DS3Q14952 304 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 PRRT3Q5FWE3 981 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 SYT6Q5T7P8 510 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 LAIR1Q6GTX8 287 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 SLC48A1Q6P1K1 146 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 Q6ZPB1 254 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 ASPGQ86U10 573 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 P2RY8Q86VZ1 359 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 NRROSQ86YC3 692 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 RPLP0P6Q8NHW5 317 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 SUN3Q8TAQ9 357 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 APH1BQ8WW43 257 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 TSACCQ96A04 125 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 ROGDIQ9GZN7 287 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 NMNAT1Q9HAN9 279 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 C3orf14Q9HBI5 128 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 ACOT13Q9NPJ3 140 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 PRDM7Q9NQW5 492 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 TBC1D23Q9NUY8 699 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 RHCGQ9UBD6 479 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 CA5BQ9Y2D0 317 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 KLHL20Q9Y2M5 609 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 ATG4BQ9Y4P1 393 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 ASB4Q9Y574 426 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 SNRNP200O75643 2136 aaKnown RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 GOLGA4Q13439 2230 aaKnown RBP7.81□□□□□ -1.16
VAMP3-201ENST00000054666 A0A1B0GVG6 124 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 A0A1W2PR48 441 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 GSAPA4D1B5 854 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 C4orf51C9J302 202 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 OR10H3O60404 316 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 F3P13726 295 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF10P21506 573 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ACSL1P33121 698 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 MASP1P48740 699 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ENTPD1P49961 510 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 YPEL5P62699 121 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ILF3Q12906 894 aaKnown RBP eCLIP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SUZ12Q15022 739 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SYPL1Q16563 259 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 FBXO43Q4G163 708 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TMEM107Q6UX40 140 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SLC16A12Q6ZSM3 486 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ARHGAP22Q7Z5H3 698 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 PAQR7Q86WK9 346 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CCDC116Q8IYX3 515 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 GPR32P1Q8NGA4 272 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TBC1D15Q8TC07 691 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 DNASE1L2Q92874 299 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 BORCS5Q969J3 196 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 FKBP10Q96AY3 582 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 BTBD2Q9BX70 525 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SERHL2Q9H4I8 314 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TRIM45Q9H8W5 580 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TRPV5Q9NQA5 729 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 PLCXD1Q9NUJ7 323 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SLC13A4Q9UKG4 626 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 MGAT4BQ9UQ53 548 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 GPC6Q9Y625 555 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 MDC1Q14676 2089 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TRBV4-1A0A0J9YWV2 114 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 EMC8O43402 210 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 BCAS1O75363 584 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CLPXO76031 633 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 RECKO95980 971 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms