RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 HBA1P69905 142 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 CBX3Q13185 183 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 LIPKQ5VXJ0 399 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 REEP3Q6NUK4 255 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 MMP21Q8N119 569 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 TMEM151AQ8N4L1 468 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 OR13H1Q8NG92 308 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 OR6K6Q8NGW6 343 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 MRGPRX1Q96LB2 322 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 FAM210AQ96ND0 272 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 DEPDC7Q96QD5 511 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 RNF6Q9Y252 685 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 MED16Q9Y2X0 877 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 CEPT1Q9Y6K0 416 aa11.48□□□□□ -0.57
CHPF2-201ENST00000035307 VILLO15195 856 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 PPM1DO15297 605 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TCF3P15923 654 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 IMPA1P29218 277 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 CSTF2P33240 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SLC9A3P48764 834 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 MAP4K2Q12851 820 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ADAM15Q13444 863 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ODF4Q2M2E3 257 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 HENMT1Q5T8I9 393 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ZC3H14Q6PJT7 736 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TMPRSS11AQ6ZMR5 421 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 RAB7BQ96AH8 199 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TMEM19Q96HH6 336 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 NPLQ9BXD5 320 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 P2RY12Q9H244 342 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 MKL2Q9ULH7 1088 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SCAMP2O15127 329 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 CCDC92Q53HC0 331 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SHISA6Q6ZSJ9 500 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TMEM126BQ8IUX1 230 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 IFT27Q9BW83 186 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TAS2R16Q9NYV7 291 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 CD300AQ9UGN4 299 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF225Q9UK10 706 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 PMF1-BGLAPU3KQ54 211 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ACACAQ13085 2346 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 NPPAP01160 153 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 MRPL3P09001 348 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 MATN1P21941 496 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 HNRNPA2B1P22626 353 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TDGQ13569 410 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SLC5A12Q1EHB4 618 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TMIEQ8NEW7 156 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 NDNFQ8TB73 568 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 C16orf78Q8WTQ4 265 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 OR1E3Q8WZA6 343 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ATOH1Q92858 354 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 LGALS12Q96DT0 336 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 ZFP3Q96NJ6 502 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 COQ7Q99807 217 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 BEX2Q9BXY8 128 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 NDEL1Q9GZM8 345 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 QRSL1Q9H0R6 528 aaKnown RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 TCEAL2Q9H3H9 227 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 CRNNQ9UBG3 495 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-201ENST00000035307 P2RX2Q9UBL9 471 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 HCN4Q9Y3Q4 1203 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
CHPF2-201ENST00000035307 C1orf105O95561 183 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 TSPAN12O95859 305 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 DRD1P21728 446 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 ADPRHP54922 357 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
CHPF2-201ENST00000035307 GRIK2Q13002 908 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 GINS1Q14691 196 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 LARS2Q15031 903 aaKnown RBP11.46□□□□□ -0.57
CHPF2-201ENST00000035307 NXPE4Q6UWF7 544 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 UCK2Q9BZX2 261 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 ANKRA2Q9H9E1 313 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 DCAF13Q9NV06 445 aaKnown RBP11.46□□□□□ -0.57
CHPF2-201ENST00000035307 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 DYRK3O43781 588 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 PRMT3O60678 531 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 ALPPP05187 535 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 SMIM18P0DKX4 95 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 MPIP34949 423 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 MAZP56270 477 aaKnown RBP11.46□□□□□ -0.57
CHPF2-201ENST00000035307 CDK5R2Q13319 367 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 CLCA4Q14CN2 919 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 RGNQ15493 299 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 TPRG1LQ5T0D9 272 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms