RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 FIGNL1Q6PIW4 674 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 POC5Q8NA72 575 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PTERQ96BW5 349 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 C11orf24Q96F05 449 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 AURKBQ96GD4 344 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 UHRF1Q96T88 793 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 EHD1Q9H4M9 534 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 FAAHO00519 579 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 GATBO75879 557 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CH25HO95992 272 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CCNOP22674 350 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 XCR1P46094 333 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 MC1RQ01726 317 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 RCAN2Q14206 197 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 OR5K2Q8NHB8 316 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 MS4A4EQ96PG1 132 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF559Q9BR84 538 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 WDR12Q9GZL7 423 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PTGDR2Q9Y5Y4 395 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 A0A0G2JPF8 293 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 A0A1W2PPL8 197 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 HNRNPCL3B7ZW38 293 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SGK494L7N484 410 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PSMD9O00233 223 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PLD2O14939 933 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SEMA3DO95025 777 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 RPLP0P05388 317 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 HNRNPCL4P0DMR1 293 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CBLP22681 906 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PDHA2P29803 388 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SLC15A1P46059 708 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 EIF1AXP47813 144 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TPMTP51580 245 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 ARG2P78540 354 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CDKL1Q00532 357 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 RGS21Q2M5E4 152 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 BLOC1S3Q6QNY0 202 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 QSOX2Q6ZRP7 698 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CNTN4Q8IWV2 1026 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CDRT4Q8N9R6 151 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 OR14L1PQ8NHC6 308 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 INSM2Q96T92 566 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 MAP3K3Q99759 626 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 MTHFD2LQ9H903 347 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TRPV5Q9NQA5 729 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 IFT46Q9NQC8 304 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 RHCGQ9UBD6 479 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 EFCAB7A8K855 629 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 H0YC42 278 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 DIRAS1O95057 198 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TMEM31Q5JXX7 168 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 RBM48Q5RL73 367 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 IER5LQ5T953 404 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 ERMP1Q7Z2K6 904 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 UBQLNLQ8IYU4 475 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SETD6Q8TBK2 473 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 ASB11Q8WXH4 323 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 ECHDC3Q96DC8 303 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 DIRAS2Q96HU8 199 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TMEM168Q9H0V1 697 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TRIM36Q9NQ86 728 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 LAMB1P07942 1786 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 C11orf98E9PRG8 122 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CKMT2P17540 419 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 GSTT1P30711 240 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 FMO3P31513 532 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 OR1E2P47887 323 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 AQP4P55087 323 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 SMCO1Q147U7 214 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 COQ5Q5HYK3 327 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 UNQ6126/PRO20091Q6UXV3 157 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 OR10Q1Q8NGQ4 319 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 APIPQ96GX9 242 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 METTL2AQ96IZ6 378 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 KAT8Q9H7Z6 458 aaKnown RBP9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 PCDHGB2Q9Y5G2 931 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 TLX2O43763 284 aaPredicted RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 HTR1EP28566 365 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 CTGFP29279 349 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 TRA2BP62995 288 aaKnown RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 EFR3AQ14156 821 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 BICRALQ6AI39 1079 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 ZSCAN4Q8NAM6 433 aaPredicted RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 OR52N2Q8NGI0 321 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 BCL7CQ8WUZ0 217 aaPredicted RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 THRSPQ92748 146 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 PDLIM5Q96HC4 596 aaKnown RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 PIP5K1AQ99755 562 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 LAMP5Q9UJQ1 280 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 BCORQ6W2J9 1755 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 RPP14O95059 124 aaKnown RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 RAB36O95755 333 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 DCNP07585 359 aaKnown RBP9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 KDELR2P33947 212 aa9.85□□□□□ -0.83
NIPAL3-201ENST00000003912 NR0B1P51843 470 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms