RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 AgkQ9ESW4 421 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Abhd1Q9QZC8 412 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 PtprdQ64487 1912 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm11361A0A1Y7VKY1 152 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fam131cA2ADB2 273 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Chst13D3Z6E3 336 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 FgaE9PV24 789 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr620E9PZ66 313 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm8922F6XVS9 199 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm45837F7D3W5 961 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zfp607bG3X9H3 648 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tpst2O88856 376 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Esr1P19785 599 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Acvr1P37172 509 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 CapzbP47757 277 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 EpxP49290 716 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lad1P57016 528 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Arf3P61205 181 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rps18P62270 152 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Dppa5bP85965 119 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 6430531B16RikQ3V2J1 307 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P4ha2Q60716 537 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cdkn2cQ60772 168 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Itga2Q62469 1178 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tas2r131Q7M708 310 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr813Q7TRH5 310 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rft1Q8C3B8 541 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rbm47Q91WT8 590 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lrrc49Q91YK0 686 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mrpl45Q9D0Q7 306 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q9D4G1 230 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ppa1Q9D819 289 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rpl38Q9JJI8 70 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Acot2Q9QYR9 453 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Srpk3Q9Z0G2 565 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Myo15aQ9QZZ4 3511 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Xlr5bA2BI50 236 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm6880A3KG45 208 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lrrc10bG3XA50 292 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm10338K7N692 204 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm5152L7N200 190 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm8906L7N2A2 181 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Serpinb9eO08806 377 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gstm6O35660 218 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cops4O88544 406 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P01679 107 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 BgnP28653 369 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Alox12eP55249 662 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Psme3P61290 254 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rps13P62301 151 aaKnown RBP6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tial1P70318 392 aaKnown RBP6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Khdc4Q3TCX3 612 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zfp868Q3UTQ6 422 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gpr75Q6X632 540 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ccdc116Q80X53 541 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 NapepldQ8BH82 396 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cdk5rap1Q8BTW8 588 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tns4Q8BZ33 696 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Asrgl1Q8C0M9 326 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mab21L3Q8CI17 429 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Syngr3Q8R191 229 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Exosc4Q921I9 245 aaKnown RBP6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ssxb1Q9CPU1 170 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 C1qtnf2Q9D8U4 294 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Il21Q9ES17 146 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Spag6Q9JLI7 507 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm3147A0A0J9YU88 481 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kif28pD3YXS5 1028 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 JhyE9Q793 770 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Herc6F2Z461 1003 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm3696K7N751 203 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm8050L7N2E3 205 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 ClppO88696 272 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Klrg1O88713 188 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P01654 111 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P01656 111 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 P03977 111 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ctla4P09793 223 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 C1qbP14106 253 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Irf1P15314 329 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Stt3aP46978 705 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 PgrQ00175 926 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Glycam1Q02596 151 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ptchd3Q0EEE2 906 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pih1d3Q3KNI6 218 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kbtbd8Q3UQV5 599 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q3USZ8 430 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kcnh1Q60603 989 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Osgepl1Q6PEB4 414 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kiaa0895lQ810A5 467 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cpsf4Q8BQZ5 211 aaKnown RBP6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 ExogQ8C163 368 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 CenpxQ8C4X1 78 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sidt2Q8CIF6 832 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Nudt4Q8R2U6 179 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Blzf1Q8R2X8 403 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mcoln3Q8R4F0 553 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Noxo1Q8VCM2 349 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Uts2rQ8VIH9 385 aa6.55□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Golga7Q91W53 137 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms