RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Snx11Q91WL6 271 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 ClpsQ9CQC2 113 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kcne2Q9D808 123 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 2200002D01RikQ9D809 114 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 IL36RNQ9QYY1 156 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Bloc1s6Q9R0C0 172 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spats1A2RRY8 269 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cldn34b1B1AZQ8 209 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Alx3O70137 343 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 LdhcP00342 332 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rc3h2P0C090 1187 aaKnown RBP12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pcbp3P57722 371 aaKnown RBP12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tmprss11cQ1JRP2 431 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fam105aQ3TVP5 353 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Hepacam2Q4VAH7 463 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Taar8aQ5QD07 344 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Trim50Q810I2 483 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cmtr2Q8BWQ4 767 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tmsb15lQ8C0W0 80 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cdkl1Q8CEQ0 352 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Agfg1Q8K2K6 561 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Wdr74Q8VCG3 384 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vsx1Q91V10 363 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dusp7Q91Z46 422 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Marc1Q9CW42 340 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Wdr55Q9CX97 388 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 BlvraQ9CY64 295 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Hhipl2Q9D2G9 717 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cldn34b2Q9D9N2 209 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tinf2Q9QXG9 341 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rpl7a-ps3A0A140T8L1 270 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 FcmrA1KXC4 422 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mup18A2BIM8 181 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tyw5A2RSX7 315 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm17026K7N6Z0 213 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cd83O88324 196 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mup11P04938 181 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Phxr1P15973 60 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fbxo40P62932 710 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dppa5bP85965 119 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm21320Q4FZE8 181 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Atg16l2Q6KAU8 623 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr594Q7TRR4 311 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Derl2Q8BNI4 239 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Plekhs1Q8BW88 474 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ptges2Q8BWM0 384 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pqlc3Q8C6U2 202 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 EndovQ8C9A2 338 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tab1Q8CF89 502 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spin4Q8K1L2 249 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kiaa0513Q8R0A7 407 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 PpcsQ8VDG5 311 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr77Q8VEY9 312 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr444Q8VFS6 310 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 CrebzfQ91ZR3 358 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Myl9Q9CQ19 172 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 3300002I08RikQ9CXH3 147 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fam96aQ9DCL2 160 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gpr88Q9EPB7 384 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 PolmQ9JIW4 496 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kcnk7Q9Z2T1 307 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr485A0A140LJF5 317 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Skint9A7TZG3 319 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Znf382B2RXC5 579 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zfp169E9Q3R6 731 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm11239E9Q5Z9 360 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm11237F2Z3W5 360 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm11238F2Z478 360 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mapk12O08911 367 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Reps1O54916 795 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Csf2P01587 141 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Nid1P10493 1245 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rpl7P14148 270 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 GlaP51569 419 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lman2lP59481 347 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr681Q3SXH8 315 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cyb5r4Q3TDX8 528 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm428Q3UTE2 360 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm11487Q5RIS0 354 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Amer3Q6NS69 780 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Hamp2Q80T19 83 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Atp6v1hQ8BVE3 483 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lcmt2Q8BYR1 686 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Coq9Q8K1Z0 313 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Wfikkn1Q8R0S6 552 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ffar2Q8VCK6 330 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr679Q8VGV0 315 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Nkd1Q99MH6 471 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cyp4f13Q99N19 523 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fis1Q9CQ92 152 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Atp5f1Q9CQQ7 256 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rprd1bQ9CSU0 326 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lrrc69Q9D9Q0 347 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Exosc1Q9DAA6 195 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Amdhd1Q9DBA8 426 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rtp4Q9ER80 249 aaKnown RBP12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc7a9Q9QXA6 487 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dnajb2Q9QYI5 324 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dpp6Q9Z218 804 aa12.8□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pld1Q9Z280 1074 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms