RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MRGBPQ9NV56 204 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 TEX10Q9NXF1 929 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-228ENST00000641847 ZIM2Q9NZV7 527 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 HCN3Q9P1Z3 774 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 DHCR7Q9UBM7 475 aaKnown RBP8.85□□□□□ -0.99
PHGDH-228ENST00000641847 FBXW2Q9UKT8 454 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 PCDHGA9Q9Y5G4 932 aaKnown RBP8.85□□□□□ -0.99
PHGDH-228ENST00000641847 CAPN7Q9Y6W3 813 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 CCDC168Q8NDH2 2452 aa8.85□□□□□ -0.99
PHGDH-228ENST00000641847 C9JVG2 144 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 H0YIG0 161 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PSMD12O00232 456 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ANKRD28O15084 1053 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 SCAMP2O15127 329 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 AKAP10O43572 662 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PRKRAO75569 313 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CREG1O75629 220 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 SLC22A3O75751 556 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 AIFM1O95831 613 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 DLGAP3O95886 979 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PDGFAP04085 211 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FAM58BPP0C7Q3 252 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 NR2F6P10588 404 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ZNF28P17035 718 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FBLP22087 321 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 GPX3P22352 226 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ALAS2P22557 587 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 JAK1P23458 1154 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PIK3R1P27986 724 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 GSTM5P46439 218 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CLNS1AP54105 237 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 LIM2P55344 173 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CLDN8P56748 225 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 TRA2BP62995 288 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MAT1AQ00266 395 aaKnown RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 TNFRSF17Q02223 184 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 KLC1Q07866 573 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 C2orf80Q0P641 193 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 KLF10Q13118 480 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 RUNX2Q13950 521 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 AGKQ53H12 422 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FAM71E1Q6IPT2 247 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 JMJD6Q6NYC1 403 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PRMT9Q6P2P2 845 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 GK5Q6ZS86 529 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 TRPM8Q7Z2W7 1104 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MCEMP1Q8IX19 187 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MMP21Q8N119 569 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CA13Q8N1Q1 262 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 KRTCAP2Q8N6L1 136 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FAM47BQ8NA70 645 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CLIP3Q96DZ5 547 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MVB12AQ96EY5 273 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MMABQ96EY8 250 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 EGLN2Q96KS0 407 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 TEX37Q96LM6 180 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PCNX1Q96RV3 2341 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MAPKAP1Q9BPZ7 522 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CCDC106Q9BWC9 280 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 FAIM2Q9BWQ8 316 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 NPLQ9BXD5 320 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-228ENST00000641847 RBCK1Q9BYM8 510 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 LYRM4Q9HD34 91 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PHF11Q9UIL8 331 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 PADI1Q9ULC6 663 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 DAPP1Q9UN19 280 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 CDC14AQ9UNH5 594 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ASB4Q9Y574 426 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 MAU2Q9Y6X3 613 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 SPACA6W5XKT8 324 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ABCA2Q9BZC7 2435 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
PHGDH-228ENST00000641847 ANKUB1A6NFN9 424 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 NR5A2O00482 541 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 SLC22A2O15244 555 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 PRMT3O60678 531 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 DNAJB6O75190 326 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 GUCY1B2O75343 617 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 DNAJB5O75953 348 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 KIAA0754O94854 1291 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 HBQ1P09105 142 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 COX7A2P14406 83 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 ITGAXP20702 1163 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 DDCP20711 480 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 PRPS1L1P21108 318 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 CPN2P22792 545 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 IL12AP29459 219 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 BUD31P41223 144 aaPredicted RBP8.83□□□□□ -1
PHGDH-228ENST00000641847 OR1D4P47884 311 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 ALDH9A1P49189 494 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 CCL11P51671 97 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 RAB38P57729 211 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 C21orf58P58505 322 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 DSG2Q14126 1118 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 HEPACAMQ14CZ8 416 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 MAPRE2Q15555 327 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms