RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 LPAL2Q16609 132 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 PRSS53Q2L4Q9 553 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 HLA-BQ31612 363 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 DEFB134Q4QY38 66 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 SNAP47Q5SQN1 464 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 C18orf63Q68DL7 685 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ERICH5Q6P6B1 374 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 SZRD1Q7Z422 152 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 GPR141Q7Z602 305 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 C17orf82Q86X59 251 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 MCATQ8IVS2 390 aaKnown RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 SLC35F3Q8IY50 421 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ZCCHC7Q8N3Z6 543 aaKnown RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 NATD1Q8N6N6 113 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 OR5AK3PQ8NH89 298 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 UCN3Q969E3 161 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 SDCCAG3Q96C92 435 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 TM4SF19Q96DZ7 209 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ZDHHC12Q96GR4 267 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 MPP4Q96JB8 637 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 MAGED4Q96JG8 741 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 SERINC2Q96SA4 455 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 MAPKAP1Q9BPZ7 522 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 TWSG1Q9GZX9 223 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 GAREM1Q9H706 876 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 KAT8Q9H7Z6 458 aaKnown RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 TPT1P8Q9HAU6 139 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 FAM60AQ9NP50 221 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 C1GALT1Q9NS00 363 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 GIMAP4Q9NUV9 329 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 TAS2R9Q9NYW1 312 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 PHF11Q9UIL8 331 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 UTS2RQ9UKP6 389 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ACSL6Q9UKU0 697 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ENTPD4Q9Y227 616 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ASB4Q9Y574 426 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 PCDHGB5Q9Y5G0 923 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 KLK4Q9Y5K2 254 aa8.38□□□□□ -1.07
PHGDH-219ENST00000641513 ARID1BQ8NFD5 2236 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-219ENST00000641513 CABIN1Q9Y6J0 2220 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 A0A1B0GTQ1 180 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 A0A1W2PR48 441 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 C1orf226A1L170 272 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 CPED1A4D0V7 1026 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 EME2A4GXA9 379 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 TLCD2A6NGC4 264 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZSCAN9O15535 394 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 DUX1O43812 170 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 MRPS14O60783 128 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 OR6B1O95007 311 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 KRT75O95678 551 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 AIFM1O95831 613 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 C1QCP02747 245 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 THRBP10828 461 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 GLB1P16278 677 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ALOX12P18054 663 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 UQCRC2P22695 453 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 DCKP27707 260 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 EPHA8P29322 1005 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 TLX1P31314 330 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SLC5A2P31639 672 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 BUD31P41223 144 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 CRATP43155 626 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 MAGEA2P43356 314 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RXRGP48443 463 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 NCBP2P52298 156 aaKnown RBP eCLIP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 EPHA4P54764 986 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RAB15P59190 212 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RELAQ04206 551 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SLC14A1Q13336 389 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 TOP3AQ13472 1001 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 GAB1Q13480 694 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SHBQ15464 509 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 NR0B2Q15466 257 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 MPEG1Q2M385 716 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 MRM1Q6IN84 353 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF773Q6PK81 442 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF551Q7Z340 670 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RABEPKQ7Z6M1 372 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SERPINA11Q86U17 422 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 CROCCP3Q8IVE0 287 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 FBXO30Q8TB52 745 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZFP90Q8TF47 636 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 OR5P2Q8WZ92 322 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 HDAC2Q92769 488 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZBED6CLQ96FA7 236 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 TCTN2Q96GX1 697 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 REXO5Q96IC2 774 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SEPHS2Q99611 448 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RBM4BQ9BQ04 359 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 BCL7BQ9BQE9 202 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 DUSP23Q9BVJ7 150 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RBM4Q9BWF3 364 aaKnown RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 GABARAPL1Q9H0R8 117 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 RAD21L1Q9H4I0 556 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SYNDIG1Q9H7V2 258 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms