RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 NANOGP8Q6NSW7 305 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 ZNF551Q7Z340 670 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-210ENST00000641115 OR4N5Q8IXE1 308 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 WDR36Q8NI36 951 aaKnown RBP18.65■□□□□ 0.58
PHGDH-210ENST00000641115 ZNF681Q96N22 645 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 AMDHD1Q96NU7 426 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 ANKRD27Q96NW4 1050 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 SH3GL1Q99961 368 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 ASPSCR1Q9BZE9 553 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 GLIPR2Q9H4G4 154 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 NANOGQ9H9S0 305 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 SLC25A37Q9NYZ2 338 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.65■□□□□ 0.58
PHGDH-210ENST00000641115 AGXTP21549 392 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 PTPN6P29350 595 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 SOAT1P35610 550 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 ETV5P41161 510 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 SLC7A2P52569 658 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 HSD17B7P56937 341 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 KCNJ2P63252 427 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 ZNF750Q32MQ0 723 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 GTDC1Q4AE62 458 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 CCDC116Q8IYX3 515 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 OR8J3Q8NGG0 315 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 PMEPA1Q969W9 287 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 PHF12Q96QT6 1004 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 TAAR9Q96RI9 348 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 CDRT15Q96T59 188 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 DDA1Q9BW61 102 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 SLC6A13Q9NSD5 602 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 RAPGEFL1Q9UHV5 662 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 L3MBTL1Q9Y468 752 aa18.64■□□□□ 0.57
PHGDH-210ENST00000641115 ZFHX2Q9C0A1 2572 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-210ENST00000641115 TRBV5-3A0A0A0MS03 114 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MEN1O00255 615 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 CTNSO60931 367 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 KLK3P07288 261 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 CPMP14384 443 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 HOXB9P17482 250 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 RORAP35398 523 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ID2Q02363 134 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 STX4Q12846 297 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ERV3-1Q14264 604 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 C3orf38Q5JPI3 329 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MFSD4BQ5TF39 518 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 TMPRSS12Q86WS5 348 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MSRB3Q8IXL7 192 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 CACTIN-AS1Q8N1I8 211 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 SUN3Q8TAQ9 357 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 LRFN5Q96NI6 719 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 DPH2Q9BQC3 489 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 SEMA3GQ9NS98 782 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 SNX8Q9Y5X2 465 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 B3GALT1Q9Y5Z6 326 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 NUP214P35658 2090 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 A0A1W2PS29 197 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 BMP10O95393 424 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 NQO1P15559 274 aaKnown RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 PORP16435 677 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ZNF28P17035 718 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 OCA2Q04671 838 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 GAB1Q13480 694 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MINDY4Q4G0A6 757 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 RUNDC3AQ59EK9 446 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 RABL3Q5HYI8 236 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 TMEM164Q5U3C3 297 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ZNF385CQ66K41 422 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MED25Q71SY5 747 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 COX15Q7KZN9 410 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 TMEM125Q96AQ2 219 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ANKRD9Q96BM1 317 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-210ENST00000641115 SLC35A5Q9BS91 424 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 LANCL2Q9NS86 450 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 TMEM181Q9P2C4 612 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ABCD2Q9UBJ2 740 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 ERVK-11Q9UQG0 969 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 MMACHCQ9Y4U1 282 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 NEUROG3Q9Y4Z2 214 aa18.63■□□□□ 0.57
PHGDH-210ENST00000641115 JRKO75564 520 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 PPIBP23284 216 aaKnown RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 MTPNP58546 118 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 DUSP2Q05923 314 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 TARDBPQ13148 414 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 SPDYE7PQ495Y7 208 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 SAMD4BQ5PRF9 694 aaKnown RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 ZC3H7AQ8IWR0 971 aaKnown RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 SCUBE1Q8IWY4 988 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 ULK2Q8IYT8 1036 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 PSMA8Q8TAA3 256 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 AURKBQ96GD4 344 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 CLPTM1LQ96KA5 538 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 THUMPD3Q9BV44 507 aaKnown RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 TRIM8Q9BZR9 551 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 CXorf36Q9H7Y0 433 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 SLC22A11Q9NSA0 550 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 C14orf105Q9NVL8 296 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 IFT80Q9P2H3 777 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-210ENST00000641115 CTSFQ9UBX1 484 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 SATB2Q9UPW6 733 aa18.62■□□□□ 0.57
PHGDH-210ENST00000641115 FAM186AA6NE01 2351 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms